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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:45.3TPM
GTEx:16.6RPKM
FANTOM5:21.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA022840

  

Antibody HPA022842

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA022840

  

Antibody HPA022842

  

Adipocytes

 High   Medium  

Fibroblasts

 Medium   High  

Peripheral nerve

 Medium   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

45.3
N/A Female, age 80
Sample 1
TPM: 49.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 36.2
N/A Female, age 57
Sample 3
TPM: 39.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 49.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 52.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.8
Samples: 350

Max RPKM: 23.2
Min RPKM: 9.7
Std RPKM: 2.5
Median RPKM: 16.9
GTEX-PX3G-0226-SM-3NB2C 23.2
GTEX-O5YT-0226-SM-32PK5 22.6
GTEX-13OW6-0526-SM-5L3HY 22.3
GTEX-XUYS-0226-SM-47JX1 22.3
GTEX-XGQ4-2226-SM-4AT4Y 22.2
GTEX-XMK1-2226-SM-4B673 21.9
GTEX-T6MN-0226-SM-32PMD 21.8
GTEX-TML8-2026-SM-32QOP 21.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 16.3
Samples: 227

Max RPKM: 25.2
Min RPKM: 9.5
Std RPKM: 2.7
Median RPKM: 16.2
GTEX-14DAQ-2526-SM-5RQIO 25.2
GTEX-XMK1-0926-SM-4B66X 25.0
GTEX-ZPU1-1226-SM-5HL71 22.3
GTEX-12WSG-0426-SM-5FQSE 22.0
GTEX-13S86-0926-SM-5SI6I 21.8
GTEX-WHWD-0826-SM-3LK6R 21.6
GTEX-13U4I-1726-SM-5J1MF 21.5
GTEX-ZF2S-1526-SM-5S2OO 21.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

21.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 21.0
FF:10010-101C1 65,65,76 years, mixed 21.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.