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ALYREF

ANTIBODY INFORMATION
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Provider

 Atlas Antibodies
Sigma-Aldrich
   Atlas Antibodies
Sigma-Aldrich
   Santa Cruz Biotechnology
  

Product name

 HPA019799   HPA061282   sc-32311  

Host species

 Rabbit   Rabbit   Mouse  

Clonality

 pAb   pAb   mAb  

Purity

 Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

      

Released in version

 5   13   4  

References

 1      

VALIDATION SUMMARY
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  
Immunocytochemistry


Validated
   Approved   Approved  
Immunohistochemistry

Supported     Supported  
Western blot


Validated
   Supported   Supported  
Protein array

Supported   Supported    

IMMUNOCYTOCHEMISTRY
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Formal validation: Genetic
Validated

Significant downregulation > 25% by one siRNA.		      

 

Relative fluorescence intensity (RFI)

      

Figure description

 Nuclear region of segmented cells in 10x-images      

Antibody dilution

 1:100      
 

Standard validation

 Supported   Approved   Approved  

     

Figure description

 Immunofluorescent staining of human cell line U-2 OS shows localization to nuclear speckles.   Immunofluorescent staining of human cell line U-2 OS shows localization to nuclear speckles.   Immunofluorescent staining of human cell line U-2 OS shows localization to nucleus & nucleoli.  

Antibody dilution

 1:100   1:27   1:2000  

Literature conformity

 The subcellular location is supported by literature.   The subcellular location is partly supported by literature or no literature is available.   The subcellular location is partly supported by literature or no literature is available.  

IMMUNOHISTOCHEMISTRY
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Standard validation

 Supported     Supported  

     

Figure description

 Immunohistochemical staining of human testis shows strong nuclear positivity in cells in seminiferus tubules.     Immunohistochemical staining of human gallbladder shows nuclear positivity in glandular cells.  

Expression

 RNA: detected in 37 tissues
Protein: detected in 80 cell types		     RNA: detected in 37 tissues
Protein: detected in 78 cell types		  

Retrieval

 HIER pH6     HIER pH6  

Antibody dilution

 1:225     1:5000  

Literature conformity

 Consistent with extensive gene/protein characterization data.     Consistent with extensive gene/protein characterization data.  

RNA consistency

 Consistent with RNA expression data.     Consistent with RNA expression data.  

WESTERN BLOT
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Formal validation: Genetic
Validated

Downregulation visible in one of two siRNA lanes		      

     

Figure description

 Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: siRNA 1
Lane 3: siRNA 2
Lane 4: Scrambled		      

Target mass (kDa)

 27.6      

Loading control

 Total protein image      

Antibody dilution

 1:222      
 

Standard validation

 Supported

Single band corresponding to the predicted size in kDa (+/-20%).		   Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.		   Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).		  

     

Figure description

 Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY417070)		   Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil		   Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil		  

Target mass (kDa)

 27.6   27.6   27.6  

Antibody dilution

 1:250   1:90   1:500  

PROTEIN ARRAY
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Standard validation

 Supported

Pass with single peak corresponding to interaction only with its own antigen.		   Supported

Pass with single peak corresponding to interaction only with its own antigen.		    

     

Figure description

 Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

 1:3000   1:1000    

ANTIGEN INFORMATION
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

Antigen

 Recombinant protein fragment   Recombinant protein fragment   Recombinant protein  

Length (aa)

 128   37    

Antigen sequence

 
EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN
IQLVTSQIDAQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRG
RGAGRNSKQQLSAEELDAQLDAYNARMD
  
GGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVET
   

Matching transcripts

 ALYREF-001 - ENSP00000421592 [100%]
  ALYREF-001 - ENSP00000421592 [100%]
   

Other gene match

      
ANTIGEN VIEW
ALYREF-001

RELEVANT PUBLICATIONS
 
 

Antibody HPA019799

  

Antibody HPA061282

  

Antibody CAB016281

  

1.

 Differential expression of THOC1 and ALY mRNP biogenesis/export factors in human cancers
Domínguez-Sánchez MS et al
BMC Cancer 2011;11:77
      
 

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.