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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:79.6TPM
GTEx:34.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA004872

 

Antibody HPA007728

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Low  

Neuronal cells

Low   Low  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

79.6

N/A Male, age 5
Sample 1
TPM: 58.5
overview Female, age 40
Sample 2
TPM: 85.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 95.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

34.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 38.4
Samples: 114

Max RPKM: 58.2
Min RPKM: 23.7
Std RPKM: 6.1
Median RPKM: 38.6
GTEX-X585-3026-SM-46MWF 58.2
GTEX-1192X-3126-SM-5N9BY 52.2
GTEX-ZAJG-3126-SM-5HL9J 51.7
GTEX-13SLX-3126-SM-5S2Q5 51.3
GTEX-NPJ8-1526-SM-2D7VU 49.5
GTEX-13FHO-3026-SM-5J1O9 49.4
GTEX-13NYS-3126-SM-5KLYV 48.9
GTEX-1117F-3226-SM-5N9CT 48.5
GTEX-12ZZY-3026-SM-5GCOU 48.4
GTEX-11OF3-2926-SM-5HL78 47.1
GTEX-145LS-3126-SM-5Q5BY 47.1
GTEX-11OC5-0726-SM-5P9JK 46.6
GTEX-T6MN-2626-SM-32PMQ 45.6
GTEX-11ONC-2926-SM-5P9JM 45.5
GTEX-XLM4-3026-SM-4AT6L 45.5
GTEX-13OW8-2826-SM-5L3GC 44.7
GTEX-144FL-3026-SM-5O99C 44.6
GTEX-WL46-2926-SM-3LK82 43.2
GTEX-11GS4-3126-SM-5A5LH 43.0
GTEX-13OW6-3026-SM-5J2MI 42.9
GTEX-1313W-3126-SM-5LZUI 42.8
GTEX-N7MT-1126-SM-5SI7V 42.6
GTEX-13FLW-1426-SM-5K7YE 42.4
GTEX-TSE9-3026-SM-3DB76 42.4
GTEX-13FXS-3126-SM-5J2NN 42.2
GTEX-13OVH-3026-SM-5MR4N 42.2
GTEX-12ZZW-2926-SM-5LZUP 42.1
GTEX-145MG-3026-SM-5RQJA 42.0
GTEX-13O3O-3126-SM-5KM3H 41.9
GTEX-T5JC-2426-SM-3NMDB 41.9
GTEX-ZZPT-3026-SM-5GZXH 41.7
GTEX-14ASI-3026-SM-5S2PN 41.3
GTEX-117XS-3026-SM-5N9CA 41.0
GTEX-ZVT3-3026-SM-5E43N 40.8
GTEX-13QIC-2926-SM-5J2NF 40.7
GTEX-WWYW-3126-SM-3NB39 40.7
GTEX-13NYB-3026-SM-5IJD7 40.6
GTEX-Q2AG-2926-SM-2HMJ3 40.6
GTEX-145MF-2726-SM-5O995 40.5
GTEX-13VXU-2926-SM-5LU5C 40.4
GTEX-13OVJ-2826-SM-5L3GW 40.2
GTEX-YFC4-3126-SM-5PNV6 40.2
GTEX-11GSO-2926-SM-5HL73 40.1
GTEX-Y111-2726-SM-4TT3N 40.1
GTEX-13O3Q-2926-SM-5KM45 39.9
GTEX-13S7M-3126-SM-5RQJQ 39.8
GTEX-14BMV-3026-SM-5S2PQ 39.8
GTEX-ZYFD-3026-SM-5E44C 39.8
GTEX-132Q8-3026-SM-5PNVG 39.7
GTEX-R55F-1326-SM-5S2V4 39.6
GTEX-139T8-1026-SM-5J2MC 39.5
GTEX-12WSC-3026-SM-5GCNF 39.3
GTEX-YJ89-3026-SM-5IFJI 39.3
GTEX-X4XX-3026-SM-3NMB2 39.2
GTEX-XOTO-3026-SM-4B65M 39.2
GTEX-WHSE-3026-SM-3P5ZH 38.9
GTEX-13G51-3026-SM-5IJB8 38.6
GTEX-WVLH-3026-SM-3MJG9 38.5
GTEX-RNOR-2326-SM-2TF4I 38.4
GTEX-ZUA1-3026-SM-59HJC 38.4
GTEX-11EMC-3226-SM-5EGKW 38.3
GTEX-12ZZX-2926-SM-5GCOQ 38.3
GTEX-13FHP-3026-SM-5IJBS 38.2
GTEX-13NYC-2826-SM-5K7WR 38.1
GTEX-QDT8-2926-SM-32PKC 38.0
GTEX-13JUV-2926-SM-5LZX7 37.9
GTEX-Z93S-2926-SM-57WB9 37.7
GTEX-QMR6-1426-SM-32PLA 37.5
GTEX-11DXW-1126-SM-5H12Q 37.3
GTEX-12126-1026-SM-5P9JJ 37.0
GTEX-11WQK-3026-SM-5EQL6 36.8
GTEX-QVJO-1426-SM-2S1QY 36.7
GTEX-QVUS-2826-SM-3GADB 36.7
GTEX-131YS-3126-SM-5KLYT 36.6
GTEX-111FC-3126-SM-5GZZ2 36.5
GTEX-11DXY-3226-SM-5GIDE 36.2
GTEX-11ZUS-2926-SM-5FQSL 36.2
GTEX-Y8DK-0826-SM-4TT3T 36.2
GTEX-145MH-3026-SM-5Q5DZ 36.0
GTEX-1128S-2726-SM-5H12C 35.8
GTEX-13PVQ-3026-SM-5SI93 35.7
GTEX-1399T-3026-SM-5KLZC 35.5
GTEX-WZTO-2926-SM-3NM9I 35.5
GTEX-12ZZZ-3026-SM-5BC67 35.0
GTEX-12WSH-3026-SM-5CVNI 34.9
GTEX-13JVG-3126-SM-5L3FH 34.7
GTEX-13PL6-3126-SM-5LUAR 34.5
GTEX-12WSD-3126-SM-5HL7P 34.2
GTEX-144GL-3026-SM-5Q5CW 33.9
GTEX-11PRG-2926-SM-5987A 33.7
GTEX-ZAK1-3026-SM-5S2MJ 33.0
GTEX-147GR-3026-SM-5S2ML 32.3
GTEX-14A5I-2926-SM-5Q5CQ 32.0
GTEX-13IVO-2926-SM-5L3CZ 31.8
GTEX-OXRN-2426-SM-2I5EQ 31.8
GTEX-11EI6-3026-SM-5GZZO 31.6
GTEX-13OW7-3026-SM-5L3GY 31.6
GTEX-NPJ7-2726-SM-2I3FT 31.6
GTEX-11NUK-2926-SM-5A5MD 31.3
GTEX-RU72-3026-SM-5SI7Y 31.2
GTEX-11O72-2926-SM-5BC4V 31.1
GTEX-12WSA-2926-SM-5EQ4D 31.1
GTEX-1445S-3026-SM-5O9BR 30.4
GTEX-13X6J-3026-SM-5Q5CU 30.3
GTEX-ZE7O-3126-SM-5HL5X 29.8
GTEX-131XW-3126-SM-5LZUC 29.2
GTEX-13X6K-2926-SM-5Q5D5 29.0
GTEX-11GSP-3226-SM-5986O 28.7
GTEX-T2IS-3026-SM-32QPM 28.5
GTEX-11TTK-2926-SM-5PNYP 28.2
GTEX-11NV4-2126-SM-5N9DS 27.1
GTEX-UTHO-3026-SM-3GAFB 26.6
GTEX-PVOW-2526-SM-2XCF7 26.0
GTEX-PWO3-0926-SM-2I5EY 23.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 30.3
Samples: 108

Max RPKM: 48.7
Min RPKM: 14.4
Std RPKM: 6.1
Median RPKM: 30.5
GTEX-13QJC-0011-R10a-SM-5SI63 48.7
GTEX-13O3O-0011-R10a-SM-5LUA9 44.6
GTEX-13N1W-0011-R10b-SM-5MR4H 44.0
GTEX-13SLX-0011-R10a-SM-5P9HV 43.0
GTEX-13NYS-0011-R10a-SM-5MR4S 41.8
GTEX-X4EP-0011-R10B-SM-4QASJ 41.8
GTEX-13CZV-0011-R10b-SM-5LZYD 41.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 41.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 39.6
GTEX-13FHO-0011-R10b-SM-5J2MM 38.9
GTEX-13X6K-0011-R10a-SM-5P9JR 38.1
GTEX-13OW7-0011-R10a-SM-5L3H3 37.6
GTEX-13N2G-0011-R10a-SM-5MR34 36.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 36.8
GTEX-X261-0011-R10B-SM-4E3JT 36.4
GTEX-ZF28-0011-R10a-SM-4WWEH 36.1
GTEX-131XH-0011-R10a-SM-5EGLJ 36.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 35.8
GTEX-X585-0011-R10A-SM-46MUY 35.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 34.9
GTEX-13FXS-0011-R10a-SM-5J2MA 34.8
GTEX-14BIL-0011-R10a-SM-5SI75 34.7
GTEX-N7MT-0011-R10A-SM-2I3E1 34.5
GTEX-XLM4-0011-R10A-SM-4AT5P 34.5
GTEX-X4XX-0011-R10B-SM-46MWO 34.0
GTEX-YFC4-0011-R10a-SM-4SOK5 34.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 33.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 33.8
GTEX-11H98-0011-R10b-SM-5NQ98 33.7
GTEX-12WSF-0011-R10a-SM-5LZVH 33.7
GTEX-12WSE-0011-R10b-SM-5P9JV 33.4
GTEX-13QIC-0011-R10a-SM-5O9C7 33.3
GTEX-13OW6-0011-R10a-SM-5L3HE 33.0
GTEX-13S7M-0011-R10b-SM-5PNZB 33.0
GTEX-145LS-0011-R10a-SM-5PNUQ 32.8
GTEX-NL3H-0011-R10A-SM-2I3E9 32.8
GTEX-12WSC-0011-R10a-SM-5GU57 32.4
GTEX-12WSH-0011-R10a-SM-5LZUS 32.4
GTEX-WWYW-0011-R10A-SM-3NB35 32.1
GTEX-13O3Q-0011-R10b-SM-5KM39 32.0
GTEX-14BIN-0011-R10a-SM-5S2UA 32.0
GTEX-TSE9-0011-R10A-SM-3DB7O 31.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 31.8
GTEX-1313W-0011-R10b-SM-5DUXA 31.4
GTEX-145MH-0011-R10b-SM-5PNUK 31.4
GTEX-13FLW-0011-R10b-SM-5LZZF 31.2
GTEX-XMD1-0011-R10A-SM-4AT4A 31.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 31.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 30.9
GTEX-145MG-0011-R10a-SM-5PNWG 30.9
GTEX-147GR-0011-R10b-SM-5S2UM 30.9
GTEX-13OVL-0011-R10a-SM-5L3GS 30.7
GTEX-13SLW-0011-R10a-SM-5S2UI 30.7
GTEX-12WSA-0011-R10b-SM-5P9ET 30.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 30.5
GTEX-13JUV-0011-R10b-SM-5LZXR 30.4
GTEX-T6MN-0011-R10A-SM-32QP7 30.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 30.2
GTEX-YJ89-0011-R10a-SM-4SOK9 30.1
GTEX-ZVT3-0011-R10b-SM-57WB6 30.1
GTEX-13OW8-0011-R10a-SM-5L3H6 30.0
GTEX-WZTO-0011-R10B-SM-4E3KB 29.8
GTEX-N7MS-0011-R10A-SM-2HMJK 29.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 29.4
GTEX-RVPU-0011-R10A-SM-2XCAH 29.4
GTEX-T5JC-0011-R10A-SM-32PM2 29.1
GTEX-147F4-0011-R10b-SM-5S2WC 28.8
GTEX-131YS-0011-R10b-SM-5EQ5N 28.6
GTEX-S7SE-0011-R10A-SM-2XCDF 28.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 28.0
GTEX-WVLH-0011-R10A-SM-3MJFM 28.0
GTEX-Z93S-0011-R10a-SM-4RGNM 27.9
GTEX-13NYB-0011-R10a-SM-5KM43 27.8
GTEX-11WQC-0011-R10a-SM-57WCT 27.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 27.6
GTEX-13X6I-0011-R10a-SM-5PNWI 27.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 26.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 26.7
GTEX-145LU-0011-R10a-SM-5PNWJ 26.7
GTEX-1477Z-0011-R10b-SM-5S2RF 26.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 26.5
GTEX-12WSM-0011-R10a-SM-5DUWV 26.5
GTEX-13G51-0011-R10b-SM-5LZYF 26.5
GTEX-NL4W-0011-R10A-SM-2I3DY 26.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 25.6
GTEX-13JVG-0011-R10b-SM-5KM2P 25.6
GTEX-WL46-0011-R10A-SM-3MJFQ 25.5
GTEX-13X6J-0011-R10b-SM-5PNWA 25.3
GTEX-QDT8-0011-R10A-SM-32PKG 25.1
GTEX-13IVO-0011-R10a-SM-5LZY3 24.3
GTEX-OXRN-0011-R10A-SM-2I5GC 24.1
GTEX-11WQK-0011-R10a-SM-5BC6R 23.3
GTEX-QVUS-0011-R10A-SM-3GIK3 23.2
GTEX-QMR6-0011-R10A-SM-32PKO 22.8
GTEX-P44H-0011-R10A-SM-2XCEK 22.7
GTEX-12WSD-0011-R10b-SM-5GU79 22.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 22.6
GTEX-12126-0011-R10b-SM-5BC6T 22.0
GTEX-1445S-0011-R10a-SM-5PNWB 21.1
GTEX-ZV68-0011-R10a-SM-51MT7 21.1
GTEX-ZXG5-0011-R10a-SM-57WDD 21.0
GTEX-13NZA-0011-R10b-SM-5KM54 20.6
GTEX-ZUA1-0011-R10a-SM-51MT6 20.6
GTEX-14753-0011-R10b-SM-5S2WE 20.2
GTEX-139TS-0011-R10a-SM-5K7TU 19.3
GTEX-131XW-0011-R10a-SM-5DUVA 19.2
GTEX-11ZUS-0011-R10b-SM-5BC79 18.2
GTEX-OXRO-0011-R10A-SM-2I5EH 14.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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