We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HGS
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:11.5TPM
GTEx:18.1RPKM
FANTOM5:19.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA004872

 

Antibody HPA007728

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Not detected   Not detected  
   
   
   

LIVER - HPA RNA-seq

Average TPM

11.5

N/A Female, age 60
Sample 1
TPM: 15.5
overview Male, age 54
Sample 2
TPM: 13.4
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 7.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 3.7
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 6.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 14.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 13.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 15.2
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 13.9
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 10.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

18.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 18.1
Samples: 119

Max RPKM: 36.4
Min RPKM: 8.1
Std RPKM: 5.5
Median RPKM: 17.4
GTEX-ZTPG-1426-SM-51MT3 36.4
GTEX-1497J-0726-SM-5Q5D1 32.2
GTEX-ZYY3-0626-SM-5NQ6W 32.0
GTEX-131XE-0326-SM-5LZVO 31.5
GTEX-X4XY-1626-SM-46MVN 30.4
GTEX-ZVT4-0626-SM-5E45T 30.1
GTEX-UTHO-2426-SM-4JBHD 29.9
GTEX-ZAB4-0826-SM-5LU9D 29.1
GTEX-14C38-1526-SM-5RQJ7 26.9
GTEX-12WSG-0626-SM-5FQTQ 26.2
GTEX-XBEC-1526-SM-4AT68 25.8
GTEX-S33H-1626-SM-4AD68 25.7
GTEX-QEL4-1226-SM-447A4 25.5
GTEX-X4EP-1026-SM-4QAS5 25.3
GTEX-X4EO-1126-SM-4QARQ 25.0
GTEX-RWSA-1426-SM-47JXA 24.7
GTEX-13N11-0926-SM-5IJG2 24.4
GTEX-13NZB-0626-SM-5IFH6 24.4
GTEX-13NZ9-1326-SM-5MR3V 24.1
GTEX-YFC4-1526-SM-5IFJS 23.7
GTEX-13113-1326-SM-5GCOI 23.5
GTEX-REY6-1226-SM-48FDR 22.7
GTEX-13O3O-1826-SM-5IFGW 22.6
GTEX-13QJC-0726-SM-5RQJK 22.5
GTEX-S32W-1926-SM-4AD63 22.5
GTEX-ZVT3-1626-SM-5GU66 22.4
GTEX-UPIC-0926-SM-4IHLV 21.1
GTEX-RN64-1826-SM-48FDV 20.9
GTEX-11NUK-1226-SM-5P9GM 20.8
GTEX-146FH-1526-SM-5NQBU 20.6
GTEX-Q2AG-1126-SM-48U1P 20.6
GTEX-13OW6-2626-SM-5IFF2 20.3
GTEX-RNOR-1426-SM-48FDJ 20.3
GTEX-11GSP-0626-SM-5986T 20.1
GTEX-P78B-1326-SM-3P611 20.0
GTEX-145LU-1326-SM-5LU9N 19.9
GTEX-YECK-1926-SM-4W21H 19.9
GTEX-13SLX-1226-SM-5S2Q6 19.8
GTEX-13NYB-1026-SM-5IFH3 19.7
GTEX-SJXC-1226-SM-4DM78 19.5
GTEX-144GM-1326-SM-5LU5E 19.3
GTEX-QESD-2026-SM-447BI 19.3
GTEX-T6MN-1226-SM-3NMA5 19.3
GTEX-139YR-0226-SM-5IFEM 19.2
GTEX-RU72-1426-SM-46MUF 19.2
GTEX-11ZVC-0726-SM-5FQT9 18.9
GTEX-11NV4-1326-SM-5HL6V 18.8
GTEX-13112-1426-SM-5EGH8 18.8
GTEX-QDVN-0826-SM-48TZ2 18.8
GTEX-WZTO-0626-SM-4PQYY 18.8
GTEX-139TU-0826-SM-5IJFG 18.7
GTEX-147F4-1426-SM-5LUA8 18.3
GTEX-Q734-0326-SM-48U15 18.3
GTEX-WQUQ-1926-SM-4OOSA 18.3
GTEX-139TS-1426-SM-5IFJD 18.2
GTEX-XOTO-0826-SM-4B65O 18.0
GTEX-12696-0826-SM-5EGGE 17.9
GTEX-12KS4-1326-SM-5LUB3 17.5
GTEX-X261-1726-SM-4PQYT 17.5
GTEX-11WQC-0726-SM-5EQMR 17.4
GTEX-12WSD-1426-SM-5GCN9 17.3
GTEX-131YS-1626-SM-5HL6C 17.3
GTEX-14A5I-1726-SM-5QGQ5 17.3
GTEX-11ZTS-1426-SM-5EQMM 17.1
GTEX-1269C-0626-SM-5FQSS 17.1
GTEX-RTLS-1326-SM-46MUN 17.0
GTEX-12WSI-0226-SM-5GCNA 16.9
GTEX-12WSM-0726-SM-5GCOW 16.6
GTEX-QEG4-1826-SM-4R1JN 16.1
GTEX-13FTW-1126-SM-5J2NV 15.5
GTEX-13N2G-0926-SM-5IFGJ 15.5
GTEX-11ZUS-2526-SM-59872 15.4
GTEX-14DAQ-1726-SM-5S2R2 15.4
GTEX-1212Z-0226-SM-59HLF 15.3
GTEX-UPK5-1426-SM-4JBHH 15.3
GTEX-WYVS-1926-SM-4PQZ2 15.3
GTEX-131XH-0626-SM-5LZWH 15.1
GTEX-145MO-2326-SM-5NQ9K 15.1
GTEX-Y5V5-0926-SM-4VBPZ 15.1
GTEX-13FLV-0326-SM-5N9DJ 14.9
GTEX-11OF3-0726-SM-5BC4Z 14.8
GTEX-1399T-0826-SM-5IFES 14.8
GTEX-PX3G-0826-SM-48TZS 14.8
GTEX-VUSG-0126-SM-4KL1X 14.7
GTEX-Y5LM-0426-SM-4VBRO 14.4
GTEX-11DXY-0526-SM-5EGGQ 14.2
GTEX-11EQ9-0526-SM-5A5JZ 14.2
GTEX-ZF29-2026-SM-4WWB7 14.2
GTEX-YB5E-0326-SM-5IFHU 14.1
GTEX-14AS3-0126-SM-5Q5F4 14.0
GTEX-WFON-1726-SM-4LVMQ 13.9
GTEX-147JS-1126-SM-5RQIW 13.7
GTEX-S4Z8-0526-SM-4AD4T 13.6
GTEX-ZYT6-0626-SM-5E45V 13.6
GTEX-132NY-0926-SM-5P9G3 13.5
GTEX-OOBJ-0826-SM-3NB2K 13.5
GTEX-R53T-0326-SM-48FEC 13.5
GTEX-YEC4-0826-SM-5P9FV 13.4
GTEX-11DXZ-0126-SM-5EGGY 13.2
GTEX-ZVP2-0626-SM-51MSO 12.9
GTEX-ZAB5-0426-SM-5CVMI 12.8
GTEX-12WSL-0226-SM-5CVMJ 12.7
GTEX-145MF-0826-SM-5QGQA 12.7
GTEX-13VXU-0926-SM-5IFFH 12.5
GTEX-13FTZ-0726-SM-5IFFY 12.2
GTEX-14E1K-0326-SM-5S2PE 11.9
GTEX-QV44-0326-SM-4R1KD 11.7
GTEX-ZZPU-0426-SM-5GZYH 11.6
GTEX-1399R-1226-SM-5P9GF 11.5
GTEX-TKQ2-1726-SM-4DXUP 11.5
GTEX-13PVR-0126-SM-5S2PY 11.4
GTEX-12ZZZ-1326-SM-59HKW 11.3
GTEX-RM2N-1926-SM-48FCU 11.3
GTEX-Z9EW-0426-SM-5CVM9 11.2
GTEX-ZF2S-3026-SM-4WWCH 11.2
GTEX-X3Y1-2726-SM-4PQZH 9.7
GTEX-U3ZN-0226-SM-3DB8D 8.7
GTEX-ZPU1-0826-SM-57WG2 8.7
GTEX-14753-1626-SM-5NQ9L 8.1
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

19.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 19.9
FF:10018-101C9 64,69,70 years, mixed 19.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.