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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.2TPM
GTEx:15.2RPKM
FANTOM5:24.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Chondrocytes:Not available
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA001853

  

Antibody HPA012292

  

Antibody CAB000330

  

Adipocytes

 Medium   Low   Medium  

Fibroblasts

 Medium   Not detected   Medium  

Chondrocytes

 Low  

Peripheral nerve

 Low   Medium  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not available
 
 
 

Antibody staining

Antibody HPA001853

  

Antibody HPA012292

  

Antibody CAB000330

  

Adipocytes

 Medium   Low  

Fibroblasts

 Medium   Low   Medium  

Peripheral nerve

 Not detected   Medium  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

26.2
N/A Female, age 80
Sample 1
TPM: 26.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.1
N/A Female, age 57
Sample 3
TPM: 21.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 32.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 30.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.3
Samples: 350

Max RPKM: 24.5
Min RPKM: 8.4
Std RPKM: 2.9
Median RPKM: 16.3
GTEX-U3ZN-2626-SM-3DB7T 24.5
GTEX-QDT8-0226-SM-32PL4 24.4
GTEX-QEL4-0326-SM-3GAE5 24.2
GTEX-SNMC-1326-SM-2XCFK 24.0
GTEX-NFK9-0326-SM-3MJGV 23.9
GTEX-S33H-1126-SM-2XCB6 23.4
GTEX-RTLS-0226-SM-2TF5E 22.9
GTEX-RM2N-1726-SM-2TF55 22.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.4
Samples: 227

Max RPKM: 22.5
Min RPKM: 3.7
Std RPKM: 3
Median RPKM: 13.6
GTEX-WHWD-0826-SM-3LK6R 22.5
GTEX-13O3P-0926-SM-5IFFI 21.3
GTEX-Y5V5-0226-SM-5S2N8 20.1
GTEX-13JUV-0626-SM-5J1MQ 20.0
GTEX-13PL6-0926-SM-5KLYY 19.6
GTEX-ZT9X-0926-SM-5O9C4 19.2
GTEX-13U4I-1726-SM-5J1MF 19.1
GTEX-VUSG-1426-SM-3GIJN 19.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.8
FF:10010-101C1 65,65,76 years, mixed 24.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.