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BCAP31
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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:46.5RPKM
FANTOM5:34.3Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA003906

 

Antibody CAB015350

 

Antibody CAB015424

 

Glial cells

Medium   Medium   Not detected  

Neuronal cells

High   Medium   Low  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

46.5

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 46.5
Samples: 94

Max RPKM: 87.6
Min RPKM: 21
Std RPKM: 14.2
Median RPKM: 46.3
GTEX-13O3O-0011-R1b-SM-5KM2K 87.6
GTEX-13FXS-0011-R1a-SM-5K7U6 85.1
GTEX-N7MS-0011-R1a-SM-2HMJG 77.7
GTEX-13JUV-0011-R1a-SM-5LZY4 76.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 73.4
GTEX-139TT-0011-R1a-SM-5LZVD 72.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 72.6
GTEX-13NYS-0011-R1b-SM-5MR55 70.5
GTEX-13N1W-0011-R1b-SM-5MR4T 67.5
GTEX-X585-0011-R1B-SM-46MVE 64.2
GTEX-144GL-0011-R1a-SM-5PNZ5 62.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 61.6
GTEX-131XH-0011-R1a-SM-5DUWA 60.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 59.7
GTEX-13G51-0011-R1a-SM-5LZYR 59.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 59.4
GTEX-13FHO-0011-R1b-SM-5KLZG 57.5
GTEX-RNOR-0011-R1A-SM-5SI8F 57.3
GTEX-N7MT-0011-R1a-SM-5SI7S 57.0
GTEX-1313W-0011-R1b-SM-5EQ4A 56.7
GTEX-13X6I-0011-R1b-SM-5PNZC 56.3
GTEX-WWYW-0011-R1A-SM-3TW8G 56.3
GTEX-YFC4-0011-R1a-SM-4V6EH 55.8
GTEX-145MH-0011-R1b-SM-5PNWY 55.5
GTEX-13N2G-0011-R1b-SM-5MR3G 55.0
GTEX-13OW5-0011-R1b-SM-5L3GE 54.5
GTEX-12WSM-0011-R1a-SM-5LZW6 54.2
GTEX-13NYB-0011-R1b-SM-5KM4F 53.2
GTEX-PVOW-0011-R1A-SM-32PL6 52.2
GTEX-TSE9-0011-R1A-SM-3DB7E 51.5
GTEX-14ASI-0011-R1b-SM-5S2TY 51.5
GTEX-1399T-0011-R1b-SM-5DUWN 51.4
GTEX-QVUS-0011-R1A-SM-3GAD2 49.8
GTEX-T5JC-0011-R1A-SM-32PM6 49.7
GTEX-13JVG-0011-R1a-SM-5KM32 49.3
GTEX-13PDP-0011-R1a-SM-5PNX5 49.3
GTEX-QVJO-0011-R1A-SM-2S1QI 49.1
GTEX-WL46-0011-R1A-SM-3LK6M 48.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 47.8
GTEX-13S7M-0011-R1b-SM-5PNZE 47.8
GTEX-145LS-0011-R1b-SM-5PNUP 47.8
GTEX-XOTO-0011-R1B-SM-4B65C 47.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 47.3
GTEX-T6MN-0011-R1A-SM-32QOY 47.2
GTEX-X4XX-0011-R1B-SM-3P622 46.9
GTEX-P44H-0011-R1A-SM-3NM8J 46.5
GTEX-12WSH-0011-R1a-SM-5GU5V 46.4
GTEX-QMR6-0011-R1A-SM-32PKW 46.3
GTEX-12WSE-0011-R1b-SM-5GU4V 45.7
GTEX-13FLW-0011-R1b-SM-5LZX2 45.4
GTEX-12WSF-0011-R1a-SM-5DUVI 45.1
GTEX-WZTO-0011-R1B-SM-3NMAR 44.9
GTEX-12WSD-0011-R1b-SM-5LZVY 44.5
GTEX-R55E-0011-R1A-SM-2TC6N 43.9
GTEX-NL3H-0011-R1a-SM-48TDJ 43.5
GTEX-13112-0011-R1b-SM-5HL7K 43.2
GTEX-132Q8-0011-R1a-SM-5EGLK 42.8
GTEX-13SLW-0011-R1a-SM-5S2W7 42.1
GTEX-PWO3-0011-R1A-SM-2I5EW 41.5
GTEX-QDT8-0011-R1A-SM-32PKS 41.3
GTEX-NPJ7-0011-R1a-SM-3GACT 41.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 40.7
GTEX-S7SE-0011-R1A-SM-2XCDE 40.5
GTEX-XMD1-0011-R1A-SM-4AT4C 39.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 39.7
GTEX-11GSO-0011-R1b-SM-57WD3 38.1
GTEX-131YS-0011-R1a-SM-5DUXC 38.1
GTEX-11ZTS-0011-R1a-SM-5BC71 37.2
GTEX-WVLH-0011-R1A-SM-4MVOK 37.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 36.5
GTEX-13OW7-0011-R1b-SM-5L3HF 36.0
GTEX-13QJC-0011-R1b-SM-5S2UU 35.5
GTEX-13OVL-0011-R1a-SM-5L3H5 35.3
GTEX-11ONC-0011-R1a-SM-57WD4 34.9
GTEX-11UD1-0011-R1b-SM-5BC7D 34.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 34.7
GTEX-13OW8-0011-R1a-SM-5L3HI 34.6
GTEX-UTHO-0011-R1A-SM-3GIJO 33.9
GTEX-NPJ8-0011-R1a-SM-33HCB 33.6
GTEX-139T8-0011-R1a-SM-5HL75 32.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 30.2
GTEX-1212Z-0011-R1b-SM-5BC72 29.6
GTEX-145LU-0011-R1a-SM-5Q5CE 28.9
GTEX-ZF28-0011-R1a-SM-4WWD1 28.7
GTEX-12WSB-0011-R1b-SM-5P9EY 28.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 27.7
GTEX-YJ89-0011-R1a-SM-4RGLS 26.2
GTEX-13FHP-0011-R1b-SM-5K7XL 25.6
GTEX-13NZA-0011-R1b-SM-5LUAF 24.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 23.4
GTEX-13CF2-0011-R1a-SM-5LZY1 23.0
GTEX-13FTY-0011-R1a-SM-5LZXE 22.1
GTEX-144GO-0011-R1a-SM-5PNWO 21.4
GTEX-ZE7O-0011-R1a-SM-57WDM 21.0
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

34.3

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 34.3
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 38.9
FF:10374-105G5 89 years, female 21.4

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