We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
BCAP31
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:129.7TPM
GTEx:73.6RPKM
FANTOM5:49.3Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA003906

 

Antibody CAB015350

 

Antibody CAB015424

 

Cells in red pulp

High   Medium   Not detected  

Cells in white pulp

High   Medium   Not detected  
     
     
     

SPLEEN - HPA RNA-seq

Average TPM

129.7

overview Female, age 60
Sample 1
TPM: 128.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 133.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 124.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 151.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 110.2
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

73.6

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 73.6
Samples: 104

Max RPKM: 108.3
Min RPKM: 50.2
Std RPKM: 11
Median RPKM: 73.5
GTEX-RUSQ-0126-SM-47JWV 108.3
GTEX-O5YT-0926-SM-48TDG 97.0
GTEX-12WSN-0126-SM-5DUX5 96.4
GTEX-13S86-0126-SM-5S2PI 96.2
GTEX-ZV6S-0826-SM-5NQ6Z 94.5
GTEX-12WSJ-0526-SM-5GCOZ 93.5
GTEX-13X6H-0726-SM-5Q5BX 92.8
GTEX-ZZPU-0126-SM-5E446 92.6
GTEX-132QS-0226-SM-5IFFZ 90.6
GTEX-144GN-2126-SM-5O99D 90.1
GTEX-S3XE-0626-SM-4AD6B 89.8
GTEX-T5JW-0126-SM-4DM6K 89.4
GTEX-U4B1-0526-SM-4DXTK 89.1
GTEX-11XUK-0426-SM-5EQML 88.1
GTEX-S4Z8-0226-SM-4AD5K 86.2
GTEX-131XG-0426-SM-5IFGD 84.5
GTEX-QMRM-0226-SM-4R1K7 84.3
GTEX-13CF3-0226-SM-5J1NW 83.1
GTEX-ZYFG-0726-SM-5GIDX 82.5
GTEX-U3ZN-0126-SM-4DXUM 82.2
GTEX-ZVZP-0726-SM-59HKA 82.1
GTEX-1399S-0226-SM-5IFFG 82.0
GTEX-12WSG-0926-SM-5EGIH 81.8
GTEX-QLQW-0126-SM-447BK 81.6
GTEX-QDVN-0526-SM-48TZ4 81.3
GTEX-XV7Q-0126-SM-4BRVK 79.8
GTEX-P4QS-0926-SM-48TBS 79.7
GTEX-ZDTT-1026-SM-5KM19 79.5
GTEX-VJYA-0126-SM-4KL1P 79.0
GTEX-XAJ8-0126-SM-47JYG 78.7
GTEX-OIZH-0926-SM-48TBR 77.1
GTEX-ZYWO-0226-SM-5GZX3 76.9
GTEX-Z9EW-0726-SM-5HL9H 76.7
GTEX-POMQ-0126-SM-48TD6 76.6
GTEX-1122O-0526-SM-5N9DM 76.5
GTEX-131XE-1126-SM-5EGHW 76.5
GTEX-13N11-0126-SM-5KM2Z 76.5
GTEX-U3ZH-0126-SM-4DXUK 76.2
GTEX-11DXX-0726-SM-5H12X 76.1
GTEX-11LCK-0126-SM-5A5M5 76.1
GTEX-13FH7-1326-SM-5IFG8 76.1
GTEX-12BJ1-0726-SM-5EGGF 75.7
GTEX-14DAR-0326-SM-5S2PS 75.7
GTEX-13PVR-0326-SM-5RQJY 75.4
GTEX-11NSD-0426-SM-5N9CR 75.1
GTEX-145MN-0126-SM-5RQHY 75.0
GTEX-XXEK-0126-SM-4BRVU 75.0
GTEX-11EQ9-0426-SM-5A5JY 74.8
GTEX-14E6E-1226-SM-5S2R5 74.7
GTEX-WHWD-0126-SM-4OORS 73.7
GTEX-Q2AH-0226-SM-48U1I 73.6
GTEX-ZPU1-1026-SM-4YCEQ 73.5
GTEX-ZAB5-0526-SM-5CVMU 73.4
GTEX-QV31-0126-SM-447BP 72.6
GTEX-1211K-0426-SM-5FQTP 72.1
GTEX-R55G-0226-SM-48FEI 72.1
GTEX-13111-0126-SM-5EGHO 71.9
GTEX-XGQ4-0126-SM-4AT4H 71.7
GTEX-YB5K-1926-SM-4VDT4 71.5
GTEX-YEC4-0126-SM-4W21T 71.3
GTEX-XQ8I-1726-SM-4BOQB 71.1
GTEX-147F3-0126-SM-5NQBJ 70.9
GTEX-YB5E-0426-SM-5IFHR 69.3
GTEX-13PL7-1126-SM-5MR5O 68.5
GTEX-X4LF-0226-SM-4QAS8 68.5
GTEX-WFON-0126-SM-4LVM9 68.3
GTEX-X3Y1-0126-SM-4PQZA 68.3
GTEX-Y3I4-0126-SM-4TT26 68.1
GTEX-PLZ6-0126-SM-48TC6 67.8
GTEX-Y5LM-0326-SM-4VBRN 67.7
GTEX-1399R-0226-SM-5IJGG 67.5
GTEX-Q734-0226-SM-48U1A 67.2
GTEX-146FQ-0626-SM-5LU9U 67.0
GTEX-139T6-0226-SM-5IFGZ 66.9
GTEX-11P81-1326-SM-5GU5S 66.5
GTEX-XUJ4-0226-SM-4BOP8 66.3
GTEX-ZP4G-0326-SM-4YCEF 66.3
GTEX-ZVP2-0526-SM-51MSC 65.7
GTEX-11VI4-0126-SM-5GU6Z 65.6
GTEX-UJHI-0126-SM-4IHLP 65.6
GTEX-W5WG-0626-SM-4SOID 65.5
GTEX-YFCO-0926-SM-5LUA5 65.1
GTEX-146FR-1926-SM-5NQA6 65.0
GTEX-139YR-0426-SM-5IFFV 64.6
GTEX-12WSK-0126-SM-5GCO7 63.7
GTEX-QV44-0126-SM-4R1KH 63.5
GTEX-ZLWG-0426-SM-4WWFA 62.8
GTEX-P4PP-0926-SM-48TBZ 62.7
GTEX-XPVG-0626-SM-4B65B 62.5
GTEX-XMK1-0126-SM-4B65F 62.3
GTEX-OOBJ-0926-SM-48TDO 62.2
GTEX-QCQG-0226-SM-48U28 61.8
GTEX-PW2O-0126-SM-48TC8 61.5
GTEX-Y3IK-0126-SM-4WWE9 61.1
GTEX-117YX-2126-SM-5GIEL 60.9
GTEX-Y8LW-0126-SM-4VBS1 60.6
GTEX-PX3G-0926-SM-48U12 60.1
GTEX-ZLFU-0526-SM-4WWBN 58.1
GTEX-UPK5-1626-SM-4JBHI 57.6
GTEX-11P7K-0426-SM-5BC5H 55.1
GTEX-13VXT-1326-SM-5LU3Y 53.2
GTEX-Y114-0726-SM-4TT6U 53.2
GTEX-13U4I-1626-SM-5IFFR 53.1
GTEX-X585-1826-SM-4QAS3 50.2
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

49.3

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 49.3
FF:10025-101D7 39,50,70 years, male 49.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.