We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SHTN1
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:6.7TPM
GTEx:6.1RPKM
FANTOM5:20.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA037942

 

Adipocytes

Not detected  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

6.7

overview Female, age 52
Sample 1
TPM: 5.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 4.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 12.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 4.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 6.1
Samples: 214

Max RPKM: 18.2
Min RPKM: 1
Std RPKM: 3.1
Median RPKM: 5.6
GTEX-S341-1526-SM-4AD6K 18.2
GTEX-13FTY-2226-SM-5J1ND 15.5
GTEX-R55F-1726-SM-2TF4R 14.4
GTEX-T5JC-2126-SM-32PMO 13.9
GTEX-T6MN-0726-SM-32PML 13.6
GTEX-YFC4-1426-SM-5IFJG 13.5
GTEX-WYVS-1726-SM-3NMAY 13.0
GTEX-ZF2S-2026-SM-5E461 13.0
GTEX-11EMC-2026-SM-5A5JV 12.7
GTEX-VJWN-0726-SM-3GIJ8 12.1
GTEX-WYBS-0926-SM-3NM94 12.0
GTEX-139TU-0626-SM-5KM3X 11.6
GTEX-XOT4-0726-SM-4GIAW 11.4
GTEX-XUZC-1626-SM-4BRVP 11.4
GTEX-ZVTK-0326-SM-51MRR 11.3
GTEX-13OW5-2226-SM-5L3HC 11.0
GTEX-T2IS-1526-SM-32QPR 10.9
GTEX-ZXES-0826-SM-5E43C 10.9
GTEX-SIU7-1626-SM-4BRUK 10.7
GTEX-11PRG-0826-SM-5EQ6A 10.6
GTEX-QEL4-2126-SM-447AE 10.5
GTEX-11GS4-2126-SM-5A5KR 10.4
GTEX-U3ZN-1926-SM-4DXSG 10.4
GTEX-ZU9S-1926-SM-5NQBP 10.4
GTEX-111YS-1926-SM-5GICC 10.3
GTEX-13CF2-2026-SM-5K7VI 10.3
GTEX-131XW-0726-SM-5EGK3 10.2
GTEX-11ONC-2126-SM-5HL6E 10.0
GTEX-U412-1826-SM-4DXTJ 10.0
GTEX-Q2AG-0326-SM-48U1O 9.9
GTEX-13N11-1726-SM-5J1OJ 9.8
GTEX-UPK5-2326-SM-3P5Z8 9.6
GTEX-W5X1-2326-SM-3GIL6 9.6
GTEX-U3ZH-1426-SM-4DXSR 9.5
GTEX-11DXW-0626-SM-5N9ER 9.3
GTEX-TMMY-0726-SM-33HBE 9.1
GTEX-VUSG-2226-SM-4KKZO 9.1
GTEX-11EI6-0626-SM-5985T 9.0
GTEX-T5JW-2026-SM-4DM63 9.0
GTEX-WYJK-1326-SM-3NB2T 9.0
GTEX-1269C-2426-SM-5FQSN 8.9
GTEX-Y5LM-1726-SM-4VDSX 8.8
GTEX-ZF29-1926-SM-5S2P1 8.6
GTEX-ZV7C-1826-SM-5NQ83 8.6
GTEX-13QIC-2326-SM-5LU5N 8.5
GTEX-147F4-2826-SM-5NQBN 8.5
GTEX-RU72-0626-SM-46MUI 8.5
GTEX-TML8-1226-SM-32QON 8.5
GTEX-QDT8-0626-SM-48TYW 8.4
GTEX-13NZB-2126-SM-5MR4Y 8.1
GTEX-11P7K-0726-SM-5EGKX 8.0
GTEX-R3RS-0626-SM-48FE1 7.9
GTEX-ZVT2-1826-SM-5NQ8W 7.9
GTEX-S4UY-0726-SM-4AD6X 7.8
GTEX-X15G-1626-SM-3NMB3 7.8
GTEX-X4EP-2926-SM-3P5YQ 7.8
GTEX-WRHU-0326-SM-3MJFY 7.7
GTEX-ZC5H-2626-SM-5J2MG 7.7
GTEX-11EM3-1326-SM-5N9C6 7.6
GTEX-11P81-1926-SM-5BC53 7.6
GTEX-Y3IK-2326-SM-4WWDT 7.6
GTEX-131YS-0626-SM-5EGKL 7.5
GTEX-14ABY-2126-SM-5QGQZ 7.5
GTEX-XBED-1626-SM-47JYN 7.5
GTEX-139T8-0826-SM-5L3DE 7.4
GTEX-WXYG-2226-SM-4E3IM 7.4
GTEX-Y111-2026-SM-4SOJA 7.4
GTEX-Y5V5-2126-SM-4WWFO 7.4
GTEX-132Q8-1426-SM-5EGK7 7.3
GTEX-13PL6-2926-SM-5L3I2 7.3
GTEX-QEG5-0726-SM-4R1JQ 7.3
GTEX-ZTTD-1026-SM-51MRD 7.2
GTEX-ZTX8-1226-SM-4YCE9 7.2
GTEX-ZVZQ-0826-SM-51MRF 7.2
GTEX-ZZPU-0626-SM-5E43T 7.2
GTEX-146FH-0826-SM-5SI8T 7.1
GTEX-ZY6K-1626-SM-5GZWV 7.1
GTEX-RWS6-1926-SM-47JXY 6.9
GTEX-1122O-1226-SM-5H113 6.8
GTEX-T2YK-2226-SM-32QPT 6.8
GTEX-T6MO-0326-SM-32QOK 6.8
GTEX-UJHI-1426-SM-3DB9C 6.8
GTEX-11WQC-1726-SM-5GU4W 6.7
GTEX-ZAJG-0626-SM-5HL8X 6.7
GTEX-ZLV1-1426-SM-4WWES 6.7
GTEX-12ZZX-1126-SM-5EGKB 6.6
GTEX-1313W-0826-SM-5EQ4T 6.5
GTEX-1314G-1226-SM-5BC6D 6.5
GTEX-13W3W-1226-SM-5LU4H 6.5
GTEX-WFON-1826-SM-3GILG 6.5
GTEX-Y8LW-1626-SM-5IFHX 6.5
GTEX-ZEX8-2226-SM-57WC6 6.5
GTEX-S4P3-1326-SM-4AD6V 6.4
GTEX-XMD1-0826-SM-4AT52 6.3
GTEX-XYKS-1326-SM-4BRUN 6.3
GTEX-ZF3C-2326-SM-5S2MZ 6.3
GTEX-13NZ8-0126-SM-5IJCT 6.2
GTEX-XUJ4-1926-SM-4BOOV 6.1
GTEX-ZVE2-1226-SM-5NQ8R 6.1
GTEX-Y114-2026-SM-4TT7L 6.0
GTEX-11NSD-0926-SM-5N9DR 5.9
GTEX-11GSO-1926-SM-5A5K3 5.8
GTEX-XMD2-0926-SM-4WWEF 5.8
GTEX-13O3O-0826-SM-5K7WE 5.7
GTEX-TKQ1-0226-SM-33HB5 5.7
GTEX-Y5V6-2126-SM-4WWFX 5.7
GTEX-1192X-2326-SM-5987X 5.6
GTEX-132NY-0826-SM-5K7Y7 5.6
GTEX-145LT-0726-SM-5S2VM 5.5
GTEX-Y3I4-1526-SM-4TT7K 5.5
GTEX-ZPIC-1126-SM-5BC7F 5.5
GTEX-13NZ9-1026-SM-5MR5K 5.3
GTEX-11TUW-1826-SM-5BC5D 5.2
GTEX-132AR-0826-SM-5EGK6 5.2
GTEX-TKQ2-1826-SM-33HB2 5.2
GTEX-XUW1-2326-SM-4BOO5 5.2
GTEX-1211K-1926-SM-5EQLB 5.1
GTEX-12WSK-2226-SM-5GCO5 5.1
GTEX-S33H-0326-SM-4AD6N 5.1
GTEX-ZDTT-2126-SM-5S2OJ 5.1
GTEX-1399U-1826-SM-5PNZ1 4.9
GTEX-ZV6S-1826-SM-5NQ8D 4.9
GTEX-139T6-1626-SM-5PNYZ 4.8
GTEX-WI4N-1426-SM-3LK7H 4.8
GTEX-11ZUS-0826-SM-5FQUY 4.7
GTEX-13113-1726-SM-5GCOO 4.7
GTEX-14AS3-1626-SM-5S2OY 4.7
GTEX-R53T-1526-SM-48FEK 4.7
GTEX-ZYFC-0826-SM-5E44K 4.7
GTEX-11LCK-2426-SM-5HL5F 4.6
GTEX-133LE-1726-SM-5K7VQ 4.6
GTEX-13D11-1026-SM-5IJFB 4.6
GTEX-XV7Q-2326-SM-4BRVZ 4.6
GTEX-ZDXO-0126-SM-5S2ND 4.6
GTEX-ZVT4-1026-SM-57WC4 4.6
GTEX-1117F-2826-SM-5GZXL 4.5
GTEX-12WSN-1326-SM-5GCNT 4.5
GTEX-13FHO-0826-SM-5L3E8 4.5
GTEX-13FTW-1426-SM-5LZWZ 4.5
GTEX-145MN-1926-SM-5SIAI 4.5
GTEX-145MO-0826-SM-5NQBL 4.4
GTEX-14E6E-1326-SM-5S2NR 4.3
GTEX-11I78-2226-SM-5PNYA 4.2
GTEX-12BJ1-1826-SM-5HL9N 4.2
GTEX-ZA64-1526-SM-5CVMD 4.2
GTEX-117XS-1926-SM-5GICO 4.1
GTEX-11ZTT-2326-SM-5EQLG 4.0
GTEX-144GL-2026-SM-5LU3O 4.0
GTEX-XQ8I-2426-SM-4WAXY 4.0
GTEX-YB5K-1626-SM-5IFIN 4.0
GTEX-11NV4-2026-SM-5N9DG 3.9
GTEX-13O3Q-2226-SM-5KM4O 3.9
GTEX-13CF3-2126-SM-5IFJP 3.8
GTEX-13OW8-0226-SM-5K7UP 3.8
GTEX-S7SE-0826-SM-4AT4D 3.8
GTEX-YFCO-1826-SM-4W1YH 3.8
GTEX-ZDYS-1126-SM-5K7UB 3.8
GTEX-13N1W-0626-SM-5MR4U 3.7
GTEX-13O3P-0826-SM-5L3DH 3.7
GTEX-SE5C-2126-SM-4BRUJ 3.6
GTEX-X4XY-0926-SM-4E3JD 3.6
GTEX-XQ3S-1326-SM-4BOPQ 3.6
GTEX-ZQUD-1926-SM-51MSA 3.6
GTEX-ZUA1-1526-SM-59HLS 3.6
GTEX-ZYWO-2326-SM-5GZY4 3.6
GTEX-11O72-2126-SM-5N9FO 3.4
GTEX-11OF3-1926-SM-59889 3.4
GTEX-13O61-1826-SM-5KM4I 3.4
GTEX-X261-0626-SM-3NMD9 3.4
GTEX-QMRM-1626-SM-4R1KV 3.3
GTEX-S32W-2026-SM-4AD6E 3.3
GTEX-Y9LG-1426-SM-5IFJZ 3.3
GTEX-ZYW4-0826-SM-5GIDG 3.3
GTEX-117YX-1426-SM-5H12H 3.2
GTEX-WOFL-0826-SM-3MJG1 3.2
GTEX-S4Q7-1126-SM-4AD6R 3.1
GTEX-ZAB4-2526-SM-5HL8M 3.1
GTEX-ZWKS-2826-SM-5NQ74 3.1
GTEX-11EQ9-1826-SM-5Q5AJ 3.0
GTEX-12WSB-0626-SM-59HJO 3.0
GTEX-WY7C-2726-SM-3NB3P 3.0
GTEX-XMK1-1126-SM-4IHJ8 3.0
GTEX-YJ8O-2226-SM-5IFHW 3.0
GTEX-11TT1-2126-SM-5GU5Y 2.9
GTEX-12KS4-0126-SM-5Q5A5 2.9
GTEX-145ME-1526-SM-5Q5F2 2.9
GTEX-QVJO-1826-SM-447C9 2.9
GTEX-11DXZ-1926-SM-5GZZL 2.8
GTEX-Y8E4-1626-SM-5S2MW 2.8
GTEX-YEC3-1026-SM-5IFI5 2.7
GTEX-ZT9W-2026-SM-51MRA 2.7
GTEX-ZYT6-0126-SM-5E45J 2.5
GTEX-11DXY-2326-SM-5GICW 2.4
GTEX-12WSM-1726-SM-5BC6J 2.4
GTEX-13W46-0826-SM-5LU3H 2.4
GTEX-REY6-2426-SM-48FF5 2.4
GTEX-XGQ4-0926-SM-4AT4U 2.4
GTEX-U8XE-0826-SM-4E3J1 2.3
GTEX-UTHO-1026-SM-3GAF7 2.3
GTEX-ZQG8-0726-SM-5P9H9 2.3
GTEX-13PVQ-1026-SM-5KM3M 2.2
GTEX-13S86-1226-SM-5S2OA 2.2
GTEX-PSDG-1626-SM-48TCQ 2.2
GTEX-RUSQ-2026-SM-4GIAK 2.2
GTEX-14753-2426-SM-5LU8U 2.1
GTEX-ZLFU-2126-SM-4WWEV 2.1
GTEX-11DZ1-0326-SM-5N9BN 1.9
GTEX-144GM-0926-SM-5O994 1.9
GTEX-R55D-0826-SM-48FEA 1.9
GTEX-ZZ64-1226-SM-5E43R 1.8
GTEX-13FTX-1126-SM-5N9EN 1.5
GTEX-YB5E-1726-SM-5IFJ3 1.4
GTEX-11WQK-2426-SM-5GU5C 1.3
GTEX-11P82-1326-SM-5HL62 1.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

20.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 20.2
FF:10080-102A8 77 years, female 20.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.