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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:39.8RPKM
FANTOM5:148.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA037942

 

Glial cells

Medium  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

39.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 39.8
Samples: 117

Max RPKM: 129.6
Min RPKM: 17
Std RPKM: 20
Median RPKM: 34.2
GTEX-12WSA-0011-R5b-SM-5GU5I 129.6
GTEX-QMR6-0011-R5A-SM-32PKT 122.0
GTEX-X4XX-0011-R5A-SM-46MWN 119.7
GTEX-13FHP-0011-R5b-SM-5LZY2 96.5
GTEX-Z93S-0011-R5b-SM-4RGNI 87.7
GTEX-PVOW-0011-R5A-SM-32PL7 86.6
GTEX-11UD1-0011-R5b-SM-5P9FP 80.9
GTEX-NPJ7-0011-R5a-SM-33HBK 70.6
GTEX-139T8-0011-R5b-SM-5J1MO 65.2
GTEX-R55E-0011-R5A-SM-2TC5N 64.9
GTEX-13NYB-0011-R5a-SM-5MR45 63.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60.0
GTEX-WL46-0011-R5A-SM-3LK6V 58.7
GTEX-WWYW-0011-R5A-SM-3NB3E 55.7
GTEX-YFC4-0011-R5a-SM-4RGLR 55.2
GTEX-13O3O-0011-R5b-SM-5KM44 54.4
GTEX-13CF2-0011-R5a-SM-5LZWS 54.2
GTEX-11NV4-0011-R5a-SM-5NQ88 53.8
GTEX-QVJO-0011-R5A-SM-2S1QM 50.3
GTEX-ZXG5-0011-R5b-SM-57WBN 50.2
GTEX-X585-0011-R5A-SM-46MVI 49.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 48.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 47.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 46.9
GTEX-13X6I-0011-R5a-SM-5PNWW 46.1
GTEX-12WSD-0011-R5b-SM-5CVNG 45.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 45.8
GTEX-NL4W-0011-R5a-SM-2I3GD 44.7
GTEX-XOTO-0011-R5A-SM-4B657 44.2
GTEX-144GL-0011-R5b-SM-5PNUJ 44.0
GTEX-OHPN-0011-R5A-SM-2I5FF 44.0
GTEX-145LS-0011-R5a-SM-5SI65 43.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 43.0
GTEX-WZTO-0011-R5B-SM-3NMC5 42.9
GTEX-13FLV-0011-R5a-SM-5LZWT 42.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 42.5
GTEX-12WSH-0011-R5b-SM-5P9F3 40.9
GTEX-UTHO-0011-R5A-SM-3GIJD 40.8
GTEX-S7PM-0011-R5A-SM-3NM8G 40.7
GTEX-NL3H-0011-R5a-SM-2I3GB 40.3
GTEX-13OVH-0011-R5b-SM-5KM4L 40.1
GTEX-13FLW-0011-R5a-SM-5LZX6 39.6
GTEX-11WQC-0011-R5a-SM-5BC74 39.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 38.5
GTEX-13OW7-0011-R5b-SM-5O9DM 38.2
GTEX-11H98-0011-R5b-SM-57WCF 38.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 37.1
GTEX-12WSB-0011-R5b-SM-5GU67 36.7
GTEX-12WSF-0011-R5a-SM-5HL8K 36.7
GTEX-14BIN-0011-R5b-SM-5SI78 36.7
GTEX-13OW5-0011-R5b-SM-5L3FR 36.5
GTEX-145MG-0011-R5b-SM-5S2VU 36.5
GTEX-1445S-0011-R5a-SM-5PNUS 35.3
GTEX-13FXS-0011-R5b-SM-5LZYE 35.2
GTEX-ZUA1-0011-R5b-SM-51MTG 34.7
GTEX-ZVT3-0011-R5a-SM-51MSI 34.6
GTEX-13JVG-0011-R5a-SM-5MR4O 34.2
GTEX-X261-0011-R5A-SM-3NMB4 34.2
GTEX-13X6K-0011-R5b-SM-5PNUE 33.9
GTEX-XMD1-0011-R5A-SM-4AT47 33.8
GTEX-13NYS-0011-R5a-SM-5MR4D 32.9
GTEX-RVPV-0011-R5A-SM-2TF69 32.5
GTEX-WVLH-0011-R5A-SM-3MJFW 32.1
GTEX-145MH-0011-R5a-SM-5P9JT 32.0
GTEX-N7MT-0011-R5a-SM-2I3G6 32.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 32.0
GTEX-1313W-0011-R5b-SM-5L3EP 31.8
GTEX-14BIM-0011-R5b-SM-5S2RM 31.7
GTEX-P44H-0011-R5A-SM-2XCEX 31.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 31.0
GTEX-12ZZX-0011-R5a-SM-5HL89 30.9
GTEX-13SLX-0011-R5a-SM-5O9BV 30.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 30.5
GTEX-132Q8-0011-R5a-SM-5IJDM 30.5
GTEX-144GO-0011-R5a-SM-5PNUR 30.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 30.3
GTEX-OXRN-0011-R5A-SM-2I5EF 30.2
GTEX-13JUV-0011-R5a-SM-5LZY5 29.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 29.7
GTEX-13112-0011-R5b-SM-5DUV8 29.6
GTEX-139TS-0011-R5b-SM-5J2MZ 28.3
GTEX-13S7M-0011-R5b-SM-5P9HS 28.1
GTEX-139TT-0011-R5b-SM-5K7W8 27.8
GTEX-13OW6-0011-R5a-SM-5O9BK 27.4
GTEX-RVPU-0011-R5A-SM-2XCAD 27.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 27.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 27.2
GTEX-RU72-0011-R5A-SM-2TF6U 26.8
GTEX-ZE7O-0011-R5a-SM-57WBO 26.7
GTEX-T6MN-0011-R5A-SM-32QPD 26.6
GTEX-ZV68-0011-R5a-SM-4YCDW 26.6
GTEX-14ABY-0011-R5b-SM-5SI7B 26.5
GTEX-13OVL-0011-R5b-SM-5L3FU 26.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 26.2
GTEX-1477Z-0011-R5b-SM-5PNUO 26.0
GTEX-T5JC-0011-R5A-SM-32PLK 26.0
GTEX-131YS-0011-R5b-SM-5K7YB 25.8
GTEX-12WSC-0011-R5b-SM-5CVNS 24.9
GTEX-1399T-0011-R5b-SM-5IJDK 24.9
GTEX-11GSP-0011-R5a-SM-57WBE 24.6
GTEX-T2IS-0011-R5A-SM-32QP4 24.5
GTEX-13NZA-0011-R5b-SM-5KM4K 24.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 23.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 23.8
GTEX-13CZV-0011-R5a-SM-5K7XA 23.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 23.7
GTEX-11OF3-0011-R5a-SM-57WB4 23.4
GTEX-S7SE-0011-R5A-SM-2XCDA 23.4
GTEX-TSE9-0011-R5A-SM-3DB7J 22.4
GTEX-13X6J-0011-R5b-SM-5PNWT 22.1
GTEX-13VXU-0011-R5a-SM-5O9D7 21.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 20.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 20.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 20.1
GTEX-13G51-0011-R5a-SM-5L3EB 19.0
GTEX-13CIG-0011-R5b-SM-5L3F2 17.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

148.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 148.5
FF:10164-103B2 76 years, female 193.9
FF:10379-105H1 89 years, female 103.1

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