We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HBA2
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:107.0RPKM
FANTOM5:0.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA043780

 

Antibody CAB038417

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

107.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 107.0
Samples: 117

Max RPKM: 854.4
Min RPKM: 6.2
Std RPKM: 136.9
Median RPKM: 57.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 854.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 727.0
GTEX-145MG-0011-R5b-SM-5S2VU 552.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 512.7
GTEX-RVPU-0011-R5A-SM-2XCAD 505.0
GTEX-1477Z-0011-R5b-SM-5PNUO 376.8
GTEX-N7MT-0011-R5a-SM-2I3G6 341.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 330.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 307.5
GTEX-11H98-0011-R5b-SM-57WCF 291.2
GTEX-OHPN-0011-R5A-SM-2I5FF 268.3
GTEX-13JVG-0011-R5a-SM-5MR4O 254.7
GTEX-1445S-0011-R5a-SM-5PNUS 227.4
GTEX-11UD1-0011-R5b-SM-5P9FP 215.3
GTEX-UTHO-0011-R5A-SM-3GIJD 209.1
GTEX-ZVT3-0011-R5a-SM-51MSI 197.0
GTEX-S7SE-0011-R5A-SM-2XCDA 185.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 177.1
GTEX-13NYS-0011-R5a-SM-5MR4D 175.7
GTEX-145LS-0011-R5a-SM-5SI65 174.4
GTEX-13CZV-0011-R5a-SM-5K7XA 170.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 167.1
GTEX-Z93S-0011-R5b-SM-4RGNI 155.0
GTEX-139T8-0011-R5b-SM-5J1MO 153.7
GTEX-X261-0011-R5A-SM-3NMB4 153.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 136.8
GTEX-YJ89-0011-R5a-SM-4V6GM 136.7
GTEX-OXRN-0011-R5A-SM-2I5EF 128.9
GTEX-RVPV-0011-R5A-SM-2TF69 118.4
GTEX-13FHP-0011-R5b-SM-5LZY2 115.1
GTEX-QMR6-0011-R5A-SM-32PKT 113.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 96.4
GTEX-ZE7O-0011-R5a-SM-57WBO 95.3
GTEX-NL4W-0011-R5a-SM-2I3GD 90.5
GTEX-11NV4-0011-R5a-SM-5NQ88 88.7
GTEX-ZV68-0011-R5a-SM-4YCDW 84.8
GTEX-13NZA-0011-R5b-SM-5KM4K 84.2
GTEX-S7PM-0011-R5A-SM-3NM8G 81.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 80.6
GTEX-T6MN-0011-R5A-SM-32QPD 79.9
GTEX-TSE9-0011-R5A-SM-3DB7J 79.1
GTEX-13OW7-0011-R5b-SM-5O9DM 77.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 76.7
GTEX-XOTO-0011-R5A-SM-4B657 76.7
GTEX-12WSF-0011-R5a-SM-5HL8K 74.5
GTEX-QVJO-0011-R5A-SM-2S1QM 74.0
GTEX-13FXS-0011-R5b-SM-5LZYE 71.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 68.7
GTEX-13X6I-0011-R5a-SM-5PNWW 67.6
GTEX-NL3H-0011-R5a-SM-2I3GB 66.7
GTEX-WWYW-0011-R5A-SM-3NB3E 66.7
GTEX-11GSP-0011-R5a-SM-57WBE 65.0
GTEX-P44H-0011-R5A-SM-2XCEX 64.8
GTEX-ZUA1-0011-R5b-SM-51MTG 62.9
GTEX-13CIG-0011-R5b-SM-5L3F2 62.8
GTEX-YFC4-0011-R5a-SM-4RGLR 60.9
GTEX-R55E-0011-R5A-SM-2TC5N 60.7
GTEX-T5JC-0011-R5A-SM-32PLK 59.9
GTEX-XMD1-0011-R5A-SM-4AT47 57.1
GTEX-12WSD-0011-R5b-SM-5CVNG 57.0
GTEX-13SLX-0011-R5a-SM-5O9BV 55.0
GTEX-144GO-0011-R5a-SM-5PNUR 54.2
GTEX-1313W-0011-R5b-SM-5L3EP 53.9
GTEX-14ABY-0011-R5b-SM-5SI7B 52.1
GTEX-X4XX-0011-R5A-SM-46MWN 51.8
GTEX-13JUV-0011-R5a-SM-5LZY5 50.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 50.1
GTEX-13OVH-0011-R5b-SM-5KM4L 49.8
GTEX-13CF2-0011-R5a-SM-5LZWS 49.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 48.8
GTEX-RU72-0011-R5A-SM-2TF6U 48.0
GTEX-12WSH-0011-R5b-SM-5P9F3 47.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 45.8
GTEX-WZTO-0011-R5B-SM-3NMC5 45.7
GTEX-13S7M-0011-R5b-SM-5P9HS 45.5
GTEX-144GL-0011-R5b-SM-5PNUJ 44.9
GTEX-13FLW-0011-R5a-SM-5LZX6 44.7
GTEX-139TT-0011-R5b-SM-5K7W8 44.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 43.9
GTEX-ZXG5-0011-R5b-SM-57WBN 42.5
GTEX-13X6J-0011-R5b-SM-5PNWT 42.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 41.7
GTEX-13OW5-0011-R5b-SM-5L3FR 40.8
GTEX-14BIM-0011-R5b-SM-5S2RM 40.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 40.7
GTEX-WL46-0011-R5A-SM-3LK6V 40.4
GTEX-NPJ7-0011-R5a-SM-33HBK 39.4
GTEX-132Q8-0011-R5a-SM-5IJDM 39.1
GTEX-1399T-0011-R5b-SM-5IJDK 38.9
GTEX-13X6K-0011-R5b-SM-5PNUE 35.6
GTEX-13VXU-0011-R5a-SM-5O9D7 34.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 33.9
GTEX-14BIN-0011-R5b-SM-5SI78 32.6
GTEX-13112-0011-R5b-SM-5DUV8 32.0
GTEX-N7MS-0011-R5a-SM-2HMK8 30.2
GTEX-WVLH-0011-R5A-SM-3MJFW 30.1
GTEX-145MH-0011-R5a-SM-5P9JT 30.0
GTEX-11OF3-0011-R5a-SM-57WB4 29.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 25.8
GTEX-139TS-0011-R5b-SM-5J2MZ 25.4
GTEX-13FLV-0011-R5a-SM-5LZWT 24.5
GTEX-13OW6-0011-R5a-SM-5O9BK 24.0
GTEX-12WSA-0011-R5b-SM-5GU5I 22.8
GTEX-12WSB-0011-R5b-SM-5GU67 22.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 21.1
GTEX-13OVL-0011-R5b-SM-5L3FU 20.4
GTEX-PVOW-0011-R5A-SM-32PL7 20.1
GTEX-T2IS-0011-R5A-SM-32QP4 18.0
GTEX-13G51-0011-R5a-SM-5L3EB 17.2
GTEX-13O3O-0011-R5b-SM-5KM44 16.9
GTEX-X585-0011-R5A-SM-46MVI 15.6
GTEX-12WSC-0011-R5b-SM-5CVNS 14.5
GTEX-13NYB-0011-R5a-SM-5MR45 13.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 11.0
GTEX-131YS-0011-R5b-SM-5K7YB 10.6
GTEX-12ZZX-0011-R5a-SM-5HL89 7.4
GTEX-11WQC-0011-R5a-SM-5BC74 6.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 0.0
FF:10164-103B2 76 years, female 0.0
FF:10379-105H1 89 years, female 0.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.