Tissue expression of PTPN1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	20.6	TPM
GTEx:	8.4	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuropil:	Not detected
Neuronal cells:	Low

Antibody staining	Antibody HPA012542	Antibody CAB009329	Antibody CAB015217
Endothelial cells	Not detected	Not detected	Not detected
Glial cells	Medium	Medium	Not detected
Neuropil	Not detected	Low	Not detected
Neuronal cells	Not detected	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	20.6

Male, age 5

Sample 1
TPM: 15.7

Female, age 40

Sample 2
TPM: 23.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 22.3

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	8.4

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 8.9

Samples: 114

Max RPKM: 16.2
Min RPKM: 4.4
Std RPKM: 1.8
Median RPKM: 8.8

GTEX-11WQK-3026-SM-5EQL6

16.2

GTEX-13OVJ-2826-SM-5L3GW

15.2

GTEX-13FHO-3026-SM-5J1O9

13.9

GTEX-144FL-3026-SM-5O99C

13.7

GTEX-132Q8-3026-SM-5PNVG

13.2

GTEX-12ZZY-3026-SM-5GCOU

12.3

GTEX-13NYS-3126-SM-5KLYV

12.1

GTEX-WHSE-3026-SM-3P5ZH

12.1

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.9

Samples: 108

Max RPKM: 17.9
Min RPKM: 5.1
Std RPKM: 2
Median RPKM: 7.7

GTEX-13QJC-0011-R10a-SM-5SI63

17.9

GTEX-13N2G-0011-R10a-SM-5MR34

16.6

GTEX-X4EP-0011-R10B-SM-4QASJ

13.8

GTEX-13OVJ-0011-R10b-SM-5L3HT

13.3

GTEX-13FHO-0011-R10b-SM-5J2MM

11.1

GTEX-X261-0011-R10B-SM-4E3JT

10.8

GTEX-XMD1-0011-R10A-SM-4AT4A

10.7

GTEX-11WQK-0011-R10a-SM-5BC6R

10.5

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue