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XRCC6
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    TISSUE

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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:68.5TPM
GTEx:37.8RPKM
FANTOM5:143.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Low
 

Antibody staining

Antibody HPA047549

 

Antibody HPA062226

 

Antibody CAB004254

 

Bile duct cells

Medium   Not detected   Medium  

Hepatocytes

Medium   Not detected   Not detected  
     
     
     

LIVER - HPA RNA-seq

Average TPM

68.5

N/A Female, age 60
Sample 1
TPM: 72.8
overview Male, age 54
Sample 2
TPM: 65.7
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 63.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 68.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 51.0
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 80.0
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 79.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 58.2
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 55.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 90.0
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

37.8

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 37.8
Samples: 119

Max RPKM: 84
Min RPKM: 9.8
Std RPKM: 10.9
Median RPKM: 36.1
GTEX-13N11-0926-SM-5IJG2 84.0
GTEX-YB5E-0326-SM-5IFHU 76.7
GTEX-Y5LM-0426-SM-4VBRO 66.7
GTEX-ZTPG-1426-SM-51MT3 63.4
GTEX-12WSG-0626-SM-5FQTQ 60.4
GTEX-S32W-1926-SM-4AD63 58.1
GTEX-13NZ9-1326-SM-5MR3V 57.5
GTEX-QEL4-1226-SM-447A4 56.5
GTEX-QDVN-0826-SM-48TZ2 54.0
GTEX-ZPU1-0826-SM-57WG2 52.7
GTEX-1497J-0726-SM-5Q5D1 52.0
GTEX-139YR-0226-SM-5IFEM 51.9
GTEX-13FTW-1126-SM-5J2NV 51.9
GTEX-11EQ9-0526-SM-5A5JZ 51.7
GTEX-P78B-1326-SM-3P611 49.5
GTEX-U3ZN-0226-SM-3DB8D 48.9
GTEX-UPIC-0926-SM-4IHLV 48.2
GTEX-RWSA-1426-SM-47JXA 47.3
GTEX-PX3G-0826-SM-48TZS 46.3
GTEX-12WSL-0226-SM-5CVMJ 45.7
GTEX-144GM-1326-SM-5LU5E 45.7
GTEX-S4Z8-0526-SM-4AD4T 44.5
GTEX-147F4-1426-SM-5LUA8 44.1
GTEX-146FH-1526-SM-5NQBU 43.9
GTEX-ZF29-2026-SM-4WWB7 43.9
GTEX-Q734-0326-SM-48U15 43.7
GTEX-14C38-1526-SM-5RQJ7 43.6
GTEX-R53T-0326-SM-48FEC 43.6
GTEX-13SLX-1226-SM-5S2Q6 43.1
GTEX-OOBJ-0826-SM-3NB2K 42.7
GTEX-13113-1326-SM-5GCOI 42.0
GTEX-TKQ2-1726-SM-4DXUP 41.8
GTEX-ZZPU-0426-SM-5GZYH 41.8
GTEX-13O3O-1826-SM-5IFGW 41.6
GTEX-14AS3-0126-SM-5Q5F4 41.6
GTEX-131XE-0326-SM-5LZVO 41.4
GTEX-VUSG-0126-SM-4KL1X 41.3
GTEX-WFON-1726-SM-4LVMQ 40.5
GTEX-WQUQ-1926-SM-4OOSA 40.3
GTEX-S33H-1626-SM-4AD68 40.0
GTEX-ZYY3-0626-SM-5NQ6W 39.4
GTEX-1399R-1226-SM-5P9GF 39.3
GTEX-REY6-1226-SM-48FDR 39.3
GTEX-WYVS-1926-SM-4PQZ2 39.3
GTEX-139TS-1426-SM-5IFJD 39.2
GTEX-X4XY-1626-SM-46MVN 38.8
GTEX-ZVP2-0626-SM-51MSO 38.7
GTEX-13PVR-0126-SM-5S2PY 38.4
GTEX-14753-1626-SM-5NQ9L 38.2
GTEX-12KS4-1326-SM-5LUB3 38.0
GTEX-QESD-2026-SM-447BI 37.7
GTEX-12WSI-0226-SM-5GCNA 37.6
GTEX-ZAB5-0426-SM-5CVMI 37.6
GTEX-14E1K-0326-SM-5S2PE 37.4
GTEX-Z9EW-0426-SM-5CVM9 37.4
GTEX-ZF2S-3026-SM-4WWCH 37.4
GTEX-UTHO-2426-SM-4JBHD 36.8
GTEX-12696-0826-SM-5EGGE 36.7
GTEX-YFC4-1526-SM-5IFJS 36.5
GTEX-1399T-0826-SM-5IFES 36.1
GTEX-X4EO-1126-SM-4QARQ 36.1
GTEX-11DXZ-0126-SM-5EGGY 36.0
GTEX-QV44-0326-SM-4R1KD 36.0
GTEX-RM2N-1926-SM-48FCU 35.4
GTEX-147JS-1126-SM-5RQIW 35.1
GTEX-139TU-0826-SM-5IJFG 35.0
GTEX-13FTZ-0726-SM-5IFFY 35.0
GTEX-132NY-0926-SM-5P9G3 34.9
GTEX-UPK5-1426-SM-4JBHH 34.8
GTEX-145MF-0826-SM-5QGQA 34.7
GTEX-QEG4-1826-SM-4R1JN 34.7
GTEX-X4EP-1026-SM-4QAS5 34.4
GTEX-145MO-2326-SM-5NQ9K 34.2
GTEX-XOTO-0826-SM-4B65O 34.2
GTEX-11WQC-0726-SM-5EQMR 33.6
GTEX-12WSD-1426-SM-5GCN9 33.5
GTEX-14DAQ-1726-SM-5S2R2 32.6
GTEX-ZVT4-0626-SM-5E45T 32.6
GTEX-13NYB-1026-SM-5IFH3 32.5
GTEX-12WSM-0726-SM-5GCOW 32.4
GTEX-ZAB4-0826-SM-5LU9D 32.4
GTEX-RTLS-1326-SM-46MUN 32.2
GTEX-SJXC-1226-SM-4DM78 32.2
GTEX-T6MN-1226-SM-3NMA5 32.2
GTEX-1212Z-0226-SM-59HLF 31.9
GTEX-X3Y1-2726-SM-4PQZH 31.8
GTEX-RU72-1426-SM-46MUF 31.6
GTEX-ZVT3-1626-SM-5GU66 31.4
GTEX-11ZTS-1426-SM-5EQMM 30.6
GTEX-13112-1426-SM-5EGH8 30.4
GTEX-13FLV-0326-SM-5N9DJ 30.3
GTEX-YEC4-0826-SM-5P9FV 30.2
GTEX-X261-1726-SM-4PQYT 30.1
GTEX-Y5V5-0926-SM-4VBPZ 29.9
GTEX-YECK-1926-SM-4W21H 29.8
GTEX-13QJC-0726-SM-5RQJK 29.5
GTEX-13N2G-0926-SM-5IFGJ 28.6
GTEX-14A5I-1726-SM-5QGQ5 28.6
GTEX-XBEC-1526-SM-4AT68 28.3
GTEX-11OF3-0726-SM-5BC4Z 28.1
GTEX-11NUK-1226-SM-5P9GM 27.8
GTEX-ZYT6-0626-SM-5E45V 27.8
GTEX-11DXY-0526-SM-5EGGQ 27.5
GTEX-13VXU-0926-SM-5IFFH 27.5
GTEX-11NV4-1326-SM-5HL6V 27.4
GTEX-13OW6-2626-SM-5IFF2 26.6
GTEX-RN64-1826-SM-48FDV 26.0
GTEX-11ZVC-0726-SM-5FQT9 25.9
GTEX-131YS-1626-SM-5HL6C 25.5
GTEX-1269C-0626-SM-5FQSS 25.2
GTEX-131XH-0626-SM-5LZWH 24.7
GTEX-Q2AG-1126-SM-48U1P 24.7
GTEX-13NZB-0626-SM-5IFH6 24.5
GTEX-11GSP-0626-SM-5986T 24.2
GTEX-145LU-1326-SM-5LU9N 23.1
GTEX-RNOR-1426-SM-48FDJ 21.6
GTEX-WZTO-0626-SM-4PQYY 21.5
GTEX-11ZUS-2526-SM-59872 20.6
GTEX-12ZZZ-1326-SM-59HKW 9.8
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

143.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 143.2
FF:10018-101C9 64,69,70 years, mixed 143.2

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