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XRCC6
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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:163.1TPM
GTEx:90.9RPKM
FANTOM5:152.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:High
 

Antibody staining

Antibody HPA047549

 

Antibody HPA062226

 

Antibody CAB004254

 

Cells in red pulp

High   Medium   High  

Cells in white pulp

High   High   High  
     
     
     

SPLEEN - HPA RNA-seq

Average TPM

163.1

overview Female, age 60
Sample 1
TPM: 157.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 148.7
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 157.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 155.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 196.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

90.9

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 90.9
Samples: 104

Max RPKM: 120.4
Min RPKM: 47.5
Std RPKM: 11.6
Median RPKM: 91.1
GTEX-ZPU1-1026-SM-4YCEQ 120.4
GTEX-QMRM-0226-SM-4R1K7 115.3
GTEX-U3ZH-0126-SM-4DXUK 112.4
GTEX-QLQW-0126-SM-447BK 111.5
GTEX-ZP4G-0326-SM-4YCEF 111.2
GTEX-13N11-0126-SM-5KM2Z 110.5
GTEX-XMK1-0126-SM-4B65F 110.0
GTEX-146FQ-0626-SM-5LU9U 109.8
GTEX-R55G-0226-SM-48FEI 109.6
GTEX-O5YT-0926-SM-48TDG 107.2
GTEX-PX3G-0926-SM-48U12 107.2
GTEX-U4B1-0526-SM-4DXTK 105.7
GTEX-POMQ-0126-SM-48TD6 105.1
GTEX-XXEK-0126-SM-4BRVU 104.7
GTEX-11NSD-0426-SM-5N9CR 103.5
GTEX-12WSJ-0526-SM-5GCOZ 102.8
GTEX-OOBJ-0926-SM-48TDO 102.3
GTEX-T5JW-0126-SM-4DM6K 102.2
GTEX-146FR-1926-SM-5NQA6 102.0
GTEX-13FH7-1326-SM-5IFG8 101.1
GTEX-1399S-0226-SM-5IFFG 100.5
GTEX-YB5E-0426-SM-5IFHR 99.9
GTEX-131XG-0426-SM-5IFGD 99.8
GTEX-11XUK-0426-SM-5EQML 99.5
GTEX-VJYA-0126-SM-4KL1P 98.8
GTEX-ZYWO-0226-SM-5GZX3 98.8
GTEX-13X6H-0726-SM-5Q5BX 98.7
GTEX-131XE-1126-SM-5EGHW 98.6
GTEX-14DAR-0326-SM-5S2PS 98.4
GTEX-WHWD-0126-SM-4OORS 98.1
GTEX-ZLFU-0526-SM-4WWBN 97.7
GTEX-XV7Q-0126-SM-4BRVK 96.9
GTEX-U3ZN-0126-SM-4DXUM 95.5
GTEX-ZVZP-0726-SM-59HKA 95.4
GTEX-S3XE-0626-SM-4AD6B 95.2
GTEX-132QS-0226-SM-5IFFZ 94.9
GTEX-Y5LM-0326-SM-4VBRN 94.1
GTEX-XAJ8-0126-SM-47JYG 93.5
GTEX-11VI4-0126-SM-5GU6Z 93.3
GTEX-13S86-0126-SM-5S2PI 93.3
GTEX-13CF3-0226-SM-5J1NW 92.7
GTEX-XUJ4-0226-SM-4BOP8 92.5
GTEX-XGQ4-0126-SM-4AT4H 92.3
GTEX-11DXX-0726-SM-5H12X 91.9
GTEX-13U4I-1626-SM-5IFFR 91.8
GTEX-PW2O-0126-SM-48TC8 91.6
GTEX-ZAB5-0526-SM-5CVMU 91.6
GTEX-P4QS-0926-SM-48TBS 91.5
GTEX-1399R-0226-SM-5IJGG 91.4
GTEX-11P81-1326-SM-5GU5S 91.3
GTEX-13VXT-1326-SM-5LU3Y 91.2
GTEX-145MN-0126-SM-5RQHY 91.1
GTEX-OIZH-0926-SM-48TBR 91.0
GTEX-RUSQ-0126-SM-47JWV 91.0
GTEX-QV31-0126-SM-447BP 90.3
GTEX-ZYFG-0726-SM-5GIDX 90.3
GTEX-QV44-0126-SM-4R1KH 89.9
GTEX-1122O-0526-SM-5N9DM 89.6
GTEX-YFCO-0926-SM-5LUA5 89.2
GTEX-X4LF-0226-SM-4QAS8 88.9
GTEX-12WSK-0126-SM-5GCO7 88.7
GTEX-P4PP-0926-SM-48TBZ 88.5
GTEX-ZV6S-0826-SM-5NQ6Z 88.5
GTEX-XPVG-0626-SM-4B65B 88.2
GTEX-144GN-2126-SM-5O99D 88.0
GTEX-12WSN-0126-SM-5DUX5 87.2
GTEX-147F3-0126-SM-5NQBJ 86.7
GTEX-Y3IK-0126-SM-4WWE9 86.4
GTEX-ZZPU-0126-SM-5E446 86.4
GTEX-12WSG-0926-SM-5EGIH 86.3
GTEX-ZDTT-1026-SM-5KM19 86.0
GTEX-12BJ1-0726-SM-5EGGF 85.4
GTEX-YB5K-1926-SM-4VDT4 85.3
GTEX-14E6E-1226-SM-5S2R5 84.9
GTEX-13PVR-0326-SM-5RQJY 84.7
GTEX-139T6-0226-SM-5IFGZ 84.5
GTEX-QDVN-0526-SM-48TZ4 82.7
GTEX-S4Z8-0226-SM-4AD5K 82.6
GTEX-W5WG-0626-SM-4SOID 82.5
GTEX-Y114-0726-SM-4TT6U 82.0
GTEX-ZLWG-0426-SM-4WWFA 81.6
GTEX-Y8LW-0126-SM-4VBS1 81.4
GTEX-11EQ9-0426-SM-5A5JY 81.3
GTEX-13111-0126-SM-5EGHO 81.1
GTEX-PLZ6-0126-SM-48TC6 81.1
GTEX-Q2AH-0226-SM-48U1I 81.1
GTEX-1211K-0426-SM-5FQTP 80.8
GTEX-117YX-2126-SM-5GIEL 80.3
GTEX-WFON-0126-SM-4LVM9 79.7
GTEX-UPK5-1626-SM-4JBHI 78.2
GTEX-QCQG-0226-SM-48U28 77.1
GTEX-ZVP2-0526-SM-51MSC 76.7
GTEX-Q734-0226-SM-48U1A 76.4
GTEX-X3Y1-0126-SM-4PQZA 76.3
GTEX-11P7K-0426-SM-5BC5H 75.8
GTEX-Z9EW-0726-SM-5HL9H 75.1
GTEX-13PL7-1126-SM-5MR5O 74.7
GTEX-UJHI-0126-SM-4IHLP 74.0
GTEX-XQ8I-1726-SM-4BOQB 73.5
GTEX-Y3I4-0126-SM-4TT26 73.2
GTEX-YEC4-0126-SM-4W21T 72.9
GTEX-11LCK-0126-SM-5A5M5 72.2
GTEX-139YR-0426-SM-5IFFV 71.1
GTEX-X585-1826-SM-4QAS3 47.5
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

152.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 152.2
FF:10025-101D7 39,50,70 years, male 152.2

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