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PDLIM7
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.9TPM
GTEx:27.9RPKM
FANTOM5:64.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Not detected
 

Antibody staining

Antibody HPA018794

 

Cells in glomeruli

Low  

Cells in tubules

Not detected  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

8.9

overview Female, age 58
Sample 1
TPM: 14.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 12.4
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 19.9
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 17.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 1.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 4.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 4.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 4.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 1.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

27.9

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 27.9
Samples: 32

Max RPKM: 76.7
Min RPKM: 9
Std RPKM: 16.2
Median RPKM: 22.5
GTEX-ZLFU-0926-SM-5P9F8 76.7
GTEX-13O1R-2526-SM-5N9FW 58.9
GTEX-11TTK-1926-SM-5PNW8 55.6
GTEX-147F4-2626-SM-5Q5CS 47.9
GTEX-1399S-0526-SM-5IJG8 44.9
GTEX-ZVZP-0926-SM-5GIDB 44.1
GTEX-ZYFG-1626-SM-5GZYY 39.4
GTEX-UPIC-1126-SM-4IHLO 39.4
GTEX-XPVG-0526-SM-4B65N 37.0
GTEX-12696-0926-SM-5FQTV 36.7
GTEX-QLQW-1626-SM-4R1K1 35.8
GTEX-RN64-1626-SM-48FD7 31.4
GTEX-13OVI-1126-SM-5KLZF 28.8
GTEX-11GS4-2326-SM-5A5KS 25.8
GTEX-145MN-0326-SM-5QGQI 23.7
GTEX-13RTJ-2226-SM-5S2Q1 23.4
GTEX-1497J-0826-SM-5NQAJ 21.7
GTEX-13OVL-1826-SM-5KLZR 20.6
GTEX-QDVN-1626-SM-48TZC 20.5
GTEX-ZYT6-2226-SM-5GIC9 20.0
GTEX-13112-2126-SM-5GCO4 18.2
GTEX-N7MS-1626-SM-3LK5F 15.2
GTEX-T5JC-1526-SM-4DM68 15.1
GTEX-13NYB-1726-SM-5N9G2 13.7
GTEX-NPJ8-2226-SM-3TW8D 13.4
GTEX-12WSG-0826-SM-5EQ5A 13.4
GTEX-ZC5H-1726-SM-5HL7X 12.8
GTEX-P4QS-1126-SM-3NMD5 12.7
GTEX-ZYFD-1526-SM-5NQ7T 12.5
GTEX-11OF3-1326-SM-5N9FJ 11.9
GTEX-13OW6-1826-SM-5N9F9 11.4
GTEX-Y5V6-2026-SM-5IFHO 9.0
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

64.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 64.3
FF:10017-101C8 60,62,63 years, female 64.3

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