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PDLIM7
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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.5TPM
GTEx:47.2RPKM
FANTOM5:78.3Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA018794

 

Cells in red pulp

Not detected  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

50.5

overview Female, age 60
Sample 1
TPM: 68.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 58.4
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 60.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 44.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 20.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

47.2

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 47.2
Samples: 104

Max RPKM: 89.3
Min RPKM: 22.6
Std RPKM: 14.8
Median RPKM: 43.1
GTEX-QLQW-0126-SM-447BK 89.3
GTEX-U3ZN-0126-SM-4DXUM 80.3
GTEX-POMQ-0126-SM-48TD6 78.6
GTEX-12WSG-0926-SM-5EGIH 78.3
GTEX-O5YT-0926-SM-48TDG 75.5
GTEX-ZZPU-0126-SM-5E446 75.3
GTEX-QDVN-0526-SM-48TZ4 74.9
GTEX-YB5K-1926-SM-4VDT4 73.3
GTEX-Q2AH-0226-SM-48U1I 72.3
GTEX-XPVG-0626-SM-4B65B 68.9
GTEX-QV31-0126-SM-447BP 67.6
GTEX-Z9EW-0726-SM-5HL9H 67.2
GTEX-132QS-0226-SM-5IFFZ 67.1
GTEX-145MN-0126-SM-5RQHY 66.8
GTEX-12WSJ-0526-SM-5GCOZ 66.3
GTEX-X4LF-0226-SM-4QAS8 64.8
GTEX-T5JW-0126-SM-4DM6K 64.7
GTEX-QMRM-0226-SM-4R1K7 63.9
GTEX-ZVP2-0526-SM-51MSC 63.9
GTEX-13111-0126-SM-5EGHO 62.7
GTEX-P4QS-0926-SM-48TBS 62.2
GTEX-QCQG-0226-SM-48U28 61.4
GTEX-WFON-0126-SM-4LVM9 61.0
GTEX-146FQ-0626-SM-5LU9U 60.3
GTEX-UJHI-0126-SM-4IHLP 60.3
GTEX-XMK1-0126-SM-4B65F 58.3
GTEX-ZV6S-0826-SM-5NQ6Z 58.3
GTEX-YB5E-0426-SM-5IFHR 57.3
GTEX-ZPU1-1026-SM-4YCEQ 56.7
GTEX-PLZ6-0126-SM-48TC6 55.4
GTEX-PX3G-0926-SM-48U12 54.8
GTEX-XUJ4-0226-SM-4BOP8 54.1
GTEX-11P81-1326-SM-5GU5S 52.8
GTEX-ZLWG-0426-SM-4WWFA 52.2
GTEX-XQ8I-1726-SM-4BOQB 52.1
GTEX-1122O-0526-SM-5N9DM 51.4
GTEX-X585-1826-SM-4QAS3 51.3
GTEX-13X6H-0726-SM-5Q5BX 51.0
GTEX-147F3-0126-SM-5NQBJ 50.7
GTEX-UPK5-1626-SM-4JBHI 50.7
GTEX-XGQ4-0126-SM-4AT4H 50.7
GTEX-YEC4-0126-SM-4W21T 49.9
GTEX-ZYFG-0726-SM-5GIDX 47.3
GTEX-S4Z8-0226-SM-4AD5K 46.6
GTEX-11P7K-0426-SM-5BC5H 45.3
GTEX-12WSN-0126-SM-5DUX5 45.3
GTEX-P4PP-0926-SM-48TBZ 45.1
GTEX-ZP4G-0326-SM-4YCEF 44.2
GTEX-144GN-2126-SM-5O99D 43.8
GTEX-ZLFU-0526-SM-4WWBN 43.7
GTEX-S3XE-0626-SM-4AD6B 43.5
GTEX-Y3I4-0126-SM-4TT26 43.1
GTEX-ZDTT-1026-SM-5KM19 43.1
GTEX-11LCK-0126-SM-5A5M5 42.9
GTEX-Y114-0726-SM-4TT6U 42.4
GTEX-13CF3-0226-SM-5J1NW 41.3
GTEX-OIZH-0926-SM-48TBR 41.2
GTEX-U4B1-0526-SM-4DXTK 41.2
GTEX-XXEK-0126-SM-4BRVU 40.8
GTEX-XAJ8-0126-SM-47JYG 40.7
GTEX-117YX-2126-SM-5GIEL 40.6
GTEX-VJYA-0126-SM-4KL1P 40.0
GTEX-W5WG-0626-SM-4SOID 39.9
GTEX-11EQ9-0426-SM-5A5JY 39.8
GTEX-ZAB5-0526-SM-5CVMU 39.6
GTEX-ZVZP-0726-SM-59HKA 39.6
GTEX-RUSQ-0126-SM-47JWV 39.2
GTEX-U3ZH-0126-SM-4DXUK 38.7
GTEX-Y3IK-0126-SM-4WWE9 38.4
GTEX-WHWD-0126-SM-4OORS 38.2
GTEX-1399S-0226-SM-5IFFG 38.1
GTEX-YFCO-0926-SM-5LUA5 38.0
GTEX-13N11-0126-SM-5KM2Z 37.7
GTEX-11XUK-0426-SM-5EQML 37.2
GTEX-11NSD-0426-SM-5N9CR 36.3
GTEX-ZYWO-0226-SM-5GZX3 36.3
GTEX-Y8LW-0126-SM-4VBS1 36.2
GTEX-X3Y1-0126-SM-4PQZA 36.0
GTEX-139T6-0226-SM-5IFGZ 35.3
GTEX-13PVR-0326-SM-5RQJY 35.2
GTEX-Y5LM-0326-SM-4VBRN 34.8
GTEX-11DXX-0726-SM-5H12X 34.7
GTEX-OOBJ-0926-SM-48TDO 34.7
GTEX-12BJ1-0726-SM-5EGGF 34.6
GTEX-13VXT-1326-SM-5LU3Y 34.6
GTEX-131XG-0426-SM-5IFGD 33.7
GTEX-14DAR-0326-SM-5S2PS 33.4
GTEX-QV44-0126-SM-4R1KH 33.2
GTEX-11VI4-0126-SM-5GU6Z 33.0
GTEX-139YR-0426-SM-5IFFV 32.0
GTEX-Q734-0226-SM-48U1A 31.1
GTEX-R55G-0226-SM-48FEI 31.1
GTEX-12WSK-0126-SM-5GCO7 30.7
GTEX-146FR-1926-SM-5NQA6 30.5
GTEX-131XE-1126-SM-5EGHW 30.2
GTEX-PW2O-0126-SM-48TC8 29.5
GTEX-13FH7-1326-SM-5IFG8 29.0
GTEX-13PL7-1126-SM-5MR5O 27.8
GTEX-1211K-0426-SM-5FQTP 27.6
GTEX-13S86-0126-SM-5S2PI 27.5
GTEX-XV7Q-0126-SM-4BRVK 27.3
GTEX-1399R-0226-SM-5IJGG 27.2
GTEX-14E6E-1226-SM-5S2R5 24.1
GTEX-13U4I-1626-SM-5IFFR 22.6
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

78.3

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 78.3
FF:10025-101D7 39,50,70 years, male 78.3

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