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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:434.7RPKM
FANTOM5:2304.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA049222

 

Antibody CAB002300

 

Glial cells

Low   High  

Neuronal cells

Not detected   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

434.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 434.7
Samples: 117

Max RPKM: 1806.7
Min RPKM: 66.2
Std RPKM: 315.5
Median RPKM: 346.9
GTEX-X4XX-0011-R5A-SM-46MWN 1806.7
GTEX-11UD1-0011-R5b-SM-5P9FP 1532.1
GTEX-12WSA-0011-R5b-SM-5GU5I 1511.0
GTEX-QMR6-0011-R5A-SM-32PKT 1424.1
GTEX-WL46-0011-R5A-SM-3LK6V 1215.6
GTEX-13FHP-0011-R5b-SM-5LZY2 1116.4
GTEX-12WSH-0011-R5b-SM-5P9F3 1005.3
GTEX-YJ89-0011-R5a-SM-4V6GM 994.5
GTEX-13NYB-0011-R5a-SM-5MR45 953.2
GTEX-13CF2-0011-R5a-SM-5LZWS 944.7
GTEX-Z93S-0011-R5b-SM-4RGNI 939.9
GTEX-NPJ7-0011-R5a-SM-33HBK 873.0
GTEX-139T8-0011-R5b-SM-5J1MO 794.1
GTEX-YFC4-0011-R5a-SM-4RGLR 777.1
GTEX-13O3O-0011-R5b-SM-5KM44 760.9
GTEX-144GL-0011-R5b-SM-5PNUJ 747.8
GTEX-R55E-0011-R5A-SM-2TC5N 736.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 691.1
GTEX-145MG-0011-R5b-SM-5S2VU 680.9
GTEX-XOTO-0011-R5A-SM-4B657 678.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 642.5
GTEX-11NV4-0011-R5a-SM-5NQ88 637.4
GTEX-N7MS-0011-R5a-SM-2HMK8 631.2
GTEX-X585-0011-R5A-SM-46MVI 587.8
GTEX-12WSD-0011-R5b-SM-5CVNG 542.8
GTEX-NL3H-0011-R5a-SM-2I3GB 533.3
GTEX-PVOW-0011-R5A-SM-32PL7 527.4
GTEX-ZXG5-0011-R5b-SM-57WBN 523.5
GTEX-WWYW-0011-R5A-SM-3NB3E 516.8
GTEX-12ZZX-0011-R5a-SM-5HL89 504.9
GTEX-13OW5-0011-R5b-SM-5L3FR 476.9
GTEX-13OVH-0011-R5b-SM-5KM4L 468.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 467.6
GTEX-13FLW-0011-R5a-SM-5LZX6 465.2
GTEX-145LS-0011-R5a-SM-5SI65 458.0
GTEX-139TT-0011-R5b-SM-5K7W8 447.9
GTEX-13FLV-0011-R5a-SM-5LZWT 430.2
GTEX-1313W-0011-R5b-SM-5L3EP 428.6
GTEX-13NZA-0011-R5b-SM-5KM4K 426.3
GTEX-QVJO-0011-R5A-SM-2S1QM 413.1
GTEX-1445S-0011-R5a-SM-5PNUS 411.8
GTEX-11WQC-0011-R5a-SM-5BC74 411.4
GTEX-WZTO-0011-R5B-SM-3NMC5 410.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 407.3
GTEX-13JVG-0011-R5a-SM-5MR4O 407.3
GTEX-S7PM-0011-R5A-SM-3NM8G 406.8
GTEX-13X6I-0011-R5a-SM-5PNWW 399.0
GTEX-11H98-0011-R5b-SM-57WCF 395.7
GTEX-13X6K-0011-R5b-SM-5PNUE 385.9
GTEX-14BIN-0011-R5b-SM-5SI78 381.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 379.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 377.9
GTEX-ZVT3-0011-R5a-SM-51MSI 375.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 373.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 367.4
GTEX-13FXS-0011-R5b-SM-5LZYE 362.9
GTEX-13OW7-0011-R5b-SM-5O9DM 359.4
GTEX-13NYS-0011-R5a-SM-5MR4D 356.7
GTEX-12WSF-0011-R5a-SM-5HL8K 346.9
GTEX-X261-0011-R5A-SM-3NMB4 337.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 337.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 329.2
GTEX-13SLX-0011-R5a-SM-5O9BV 324.9
GTEX-13S7M-0011-R5b-SM-5P9HS 323.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 319.6
GTEX-145MH-0011-R5a-SM-5P9JT 319.6
GTEX-12WSB-0011-R5b-SM-5GU67 319.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 317.1
GTEX-1477Z-0011-R5b-SM-5PNUO 315.0
GTEX-ZUA1-0011-R5b-SM-51MTG 311.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 308.2
GTEX-139TS-0011-R5b-SM-5J2MZ 308.1
GTEX-13112-0011-R5b-SM-5DUV8 307.3
GTEX-UTHO-0011-R5A-SM-3GIJD 281.3
GTEX-RVPV-0011-R5A-SM-2TF69 278.1
GTEX-ZE7O-0011-R5a-SM-57WBO 271.9
GTEX-RU72-0011-R5A-SM-2TF6U 268.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 267.4
GTEX-N7MT-0011-R5a-SM-2I3G6 267.2
GTEX-T5JC-0011-R5A-SM-32PLK 266.6
GTEX-NL4W-0011-R5a-SM-2I3GD 260.7
GTEX-ZV68-0011-R5a-SM-4YCDW 259.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 256.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 246.5
GTEX-OXRN-0011-R5A-SM-2I5EF 243.8
GTEX-14BIM-0011-R5b-SM-5S2RM 237.6
GTEX-WVLH-0011-R5A-SM-3MJFW 233.0
GTEX-14ABY-0011-R5b-SM-5SI7B 231.7
GTEX-OHPN-0011-R5A-SM-2I5FF 227.3
GTEX-13OVL-0011-R5b-SM-5L3FU 222.5
GTEX-132Q8-0011-R5a-SM-5IJDM 217.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 216.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 209.9
GTEX-13CZV-0011-R5a-SM-5K7XA 202.2
GTEX-13OW6-0011-R5a-SM-5O9BK 192.9
GTEX-RVPU-0011-R5A-SM-2XCAD 191.3
GTEX-T6MN-0011-R5A-SM-32QPD 189.5
GTEX-12WSC-0011-R5b-SM-5CVNS 188.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 182.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 178.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 176.1
GTEX-11OF3-0011-R5a-SM-57WB4 174.1
GTEX-13VXU-0011-R5a-SM-5O9D7 171.8
GTEX-13X6J-0011-R5b-SM-5PNWT 168.8
GTEX-13CIG-0011-R5b-SM-5L3F2 164.2
GTEX-P44H-0011-R5A-SM-2XCEX 163.9
GTEX-131YS-0011-R5b-SM-5K7YB 159.1
GTEX-1399T-0011-R5b-SM-5IJDK 158.1
GTEX-144GO-0011-R5a-SM-5PNUR 154.6
GTEX-XMD1-0011-R5A-SM-4AT47 147.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 144.8
GTEX-S7SE-0011-R5A-SM-2XCDA 143.6
GTEX-TSE9-0011-R5A-SM-3DB7J 135.1
GTEX-11GSP-0011-R5a-SM-57WBE 119.9
GTEX-13G51-0011-R5a-SM-5L3EB 109.6
GTEX-13JUV-0011-R5a-SM-5LZY5 109.1
GTEX-T2IS-0011-R5A-SM-32QP4 66.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

2304.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 2304.1
FF:10164-103B2 76 years, female 2675.8
FF:10379-105H1 89 years, female 1932.5

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