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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA SMOOTH MUSCLE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Smooth muscle

SMOOTH MUSCLE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.3TPM
FANTOM5:23.5Tags Per Million

SMOOTH MUSCLE - Annotated protein expression

Annotated protein
expression

Smooth muscle cells:Not detected
 

Antibody staining

Antibody HPA049222

 

Antibody CAB002300

 

Smooth muscle cells

Not detected   Not detected  
   
   
   

SMOOTH MUSCLE - HPA RNA-seq

Average TPM

13.3

overview Female, age 39
Sample 1
TPM: 21.7
Cell types%
Smooth muscle cells: 95
Other cell types: 5
overview Female, age 49
Sample 2
TPM: 6.1
Cell types%
Smooth muscle cells: 85
Other cell types: 15
overview Female, age 74
Sample 3
TPM: 12.1
Cell types%
Smooth muscle cells: 80
Other cell types: 20

SMOOTH MUSCLE - GTEx RNA-seq

No GTEx RNA-seq analysis found for this gene / tissue


SMOOTH MUSCLE - FANTOM5 CAGE

Average Tags Per Million

23.5

FANTOM5 sample id

Sample description

Tags Per Million

Smooth muscle
Tags Per Million: 23.5
FF:10048-101G3 20-68 years, male 23.5

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