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STK39
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.7TPM
GTEx:14.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA061803

 

Antibody HPA062802

 

Antibody CAB046022

 

Endothelial cells

Not detected   Low   Not detected  

Glial cells

Medium   Medium   Low  

Neuronal cells

High   High   Low  

Neuropil

Not detected   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

33.7

N/A Male, age 5
Sample 1
TPM: 33.4
overview Female, age 40
Sample 2
TPM: 27.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 40.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 12.3
Samples: 114

Max RPKM: 24.7
Min RPKM: 6.2
Std RPKM: 3.6
Median RPKM: 12.1
GTEX-UTHO-3026-SM-3GAFB 24.7
GTEX-PVOW-2526-SM-2XCF7 24.6
GTEX-13G51-3026-SM-5IJB8 24.5
GTEX-111FC-3126-SM-5GZZ2 19.0
GTEX-QMR6-1426-SM-32PLA 18.2
GTEX-1313W-3126-SM-5LZUI 17.3
GTEX-N7MT-1126-SM-5SI7V 17.3
GTEX-YFC4-3126-SM-5PNV6 17.0
GTEX-TSE9-3026-SM-3DB76 16.9
GTEX-13FHP-3026-SM-5IJBS 16.8
GTEX-T2IS-3026-SM-32QPM 16.8
GTEX-WL46-2926-SM-3LK82 16.7
GTEX-WVLH-3026-SM-3MJG9 16.7
GTEX-X585-3026-SM-46MWF 16.6
GTEX-14BMV-3026-SM-5S2PQ 15.9
GTEX-T5JC-2426-SM-3NMDB 15.9
GTEX-13FHO-3026-SM-5J1O9 15.7
GTEX-12ZZY-3026-SM-5GCOU 15.6
GTEX-WHSE-3026-SM-3P5ZH 15.6
GTEX-11DXY-3226-SM-5GIDE 15.5
GTEX-Y8DK-0826-SM-4TT3T 15.5
GTEX-ZAK1-3026-SM-5S2MJ 15.5
GTEX-13FLW-1426-SM-5K7YE 15.3
GTEX-RNOR-2326-SM-2TF4I 15.3
GTEX-11ZUS-2926-SM-5FQSL 15.2
GTEX-145MH-3026-SM-5Q5DZ 15.2
GTEX-QDT8-2926-SM-32PKC 14.8
GTEX-WZTO-2926-SM-3NM9I 14.8
GTEX-T6MN-2626-SM-32PMQ 14.6
GTEX-WWYW-3126-SM-3NB39 14.5
GTEX-X4XX-3026-SM-3NMB2 14.5
GTEX-14ASI-3026-SM-5S2PN 14.4
GTEX-13X6J-3026-SM-5Q5CU 14.2
GTEX-11GS4-3126-SM-5A5LH 13.9
GTEX-13OVH-3026-SM-5MR4N 13.9
GTEX-XLM4-3026-SM-4AT6L 13.9
GTEX-11PRG-2926-SM-5987A 13.7
GTEX-QVUS-2826-SM-3GADB 13.6
GTEX-13SLX-3126-SM-5S2Q5 13.5
GTEX-1192X-3126-SM-5N9BY 13.4
GTEX-13VXU-2926-SM-5LU5C 13.4
GTEX-145LS-3126-SM-5Q5BY 13.4
GTEX-XOTO-3026-SM-4B65M 13.4
GTEX-ZUA1-3026-SM-59HJC 13.3
GTEX-13NYC-2826-SM-5K7WR 13.0
GTEX-12WSC-3026-SM-5GCNF 12.9
GTEX-12ZZZ-3026-SM-5BC67 12.8
GTEX-13NYB-3026-SM-5IJD7 12.8
GTEX-13O3Q-2926-SM-5KM45 12.7
GTEX-145MG-3026-SM-5RQJA 12.7
GTEX-11NUK-2926-SM-5A5MD 12.5
GTEX-13OW8-2826-SM-5L3GC 12.4
GTEX-117XS-3026-SM-5N9CA 12.3
GTEX-13FXS-3126-SM-5J2NN 12.3
GTEX-13OW6-3026-SM-5J2MI 12.2
GTEX-12ZZX-2926-SM-5GCOQ 12.1
GTEX-131YS-3126-SM-5KLYT 12.1
GTEX-Q2AG-2926-SM-2HMJ3 12.1
GTEX-11DXW-1126-SM-5H12Q 11.7
GTEX-OXRN-2426-SM-2I5EQ 11.7
GTEX-ZAJG-3126-SM-5HL9J 11.7
GTEX-11GSO-2926-SM-5HL73 11.6
GTEX-12126-1026-SM-5P9JJ 11.6
GTEX-13O3O-3126-SM-5KM3H 11.6
GTEX-11ONC-2926-SM-5P9JM 11.4
GTEX-Z93S-2926-SM-57WB9 11.3
GTEX-12WSH-3026-SM-5CVNI 11.2
GTEX-1399T-3026-SM-5KLZC 11.2
GTEX-145MF-2726-SM-5O995 11.2
GTEX-ZYFD-3026-SM-5E44C 11.2
GTEX-11O72-2926-SM-5BC4V 11.0
GTEX-13PVQ-3026-SM-5SI93 11.0
GTEX-QVJO-1426-SM-2S1QY 11.0
GTEX-147GR-3026-SM-5S2ML 10.9
GTEX-R55F-1326-SM-5S2V4 10.9
GTEX-144GL-3026-SM-5Q5CW 10.8
GTEX-11OF3-2926-SM-5HL78 10.7
GTEX-13PL6-3126-SM-5LUAR 10.5
GTEX-Y111-2726-SM-4TT3N 10.5
GTEX-NPJ8-1526-SM-2D7VU 10.4
GTEX-YJ89-3026-SM-5IFJI 10.4
GTEX-14A5I-2926-SM-5Q5CQ 10.3
GTEX-11NV4-2126-SM-5N9DS 10.0
GTEX-ZVT3-3026-SM-5E43N 9.9
GTEX-11OC5-0726-SM-5P9JK 9.8
GTEX-1128S-2726-SM-5H12C 9.5
GTEX-13NYS-3126-SM-5KLYV 9.5
GTEX-13OVJ-2826-SM-5L3GW 9.3
GTEX-13JVG-3126-SM-5L3FH 9.2
GTEX-13QIC-2926-SM-5J2NF 8.9
GTEX-NPJ7-2726-SM-2I3FT 8.8
GTEX-11WQK-3026-SM-5EQL6 8.7
GTEX-RU72-3026-SM-5SI7Y 8.6
GTEX-ZE7O-3126-SM-5HL5X 8.6
GTEX-13JUV-2926-SM-5LZX7 8.5
GTEX-12WSA-2926-SM-5EQ4D 8.4
GTEX-12ZZW-2926-SM-5LZUP 8.2
GTEX-132Q8-3026-SM-5PNVG 8.2
GTEX-13S7M-3126-SM-5RQJQ 8.2
GTEX-13X6K-2926-SM-5Q5D5 8.2
GTEX-PWO3-0926-SM-2I5EY 8.2
GTEX-1445S-3026-SM-5O9BR 8.0
GTEX-11EI6-3026-SM-5GZZO 7.9
GTEX-1117F-3226-SM-5N9CT 7.8
GTEX-13OW7-3026-SM-5L3GY 7.8
GTEX-12WSD-3126-SM-5HL7P 7.7
GTEX-11TTK-2926-SM-5PNYP 7.3
GTEX-11GSP-3226-SM-5986O 7.0
GTEX-11EMC-3226-SM-5EGKW 6.9
GTEX-ZZPT-3026-SM-5GZXH 6.9
GTEX-131XW-3126-SM-5LZUC 6.8
GTEX-139T8-1026-SM-5J2MC 6.7
GTEX-13IVO-2926-SM-5L3CZ 6.6
GTEX-144FL-3026-SM-5O99C 6.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 16.6
Samples: 108

Max RPKM: 29.9
Min RPKM: 5.2
Std RPKM: 5.8
Median RPKM: 17.4
GTEX-QDT8-0011-R10A-SM-32PKG 29.9
GTEX-ZE7O-0011-R10a-SM-57WAZ 29.2
GTEX-145MH-0011-R10b-SM-5PNUK 27.7
GTEX-WVLH-0011-R10A-SM-3MJFM 27.4
GTEX-12WSC-0011-R10a-SM-5GU57 26.8
GTEX-S7SE-0011-R10A-SM-2XCDF 26.6
GTEX-T6MN-0011-R10A-SM-32QP7 26.4
GTEX-WL46-0011-R10A-SM-3MJFQ 26.1
GTEX-YFC4-0011-R10a-SM-4SOK5 25.5
GTEX-WWYW-0011-R10A-SM-3NB35 25.1
GTEX-X585-0011-R10A-SM-46MUY 25.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 24.1
GTEX-12WSE-0011-R10b-SM-5P9JV 23.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 23.8
GTEX-145MG-0011-R10a-SM-5PNWG 23.3
GTEX-1313W-0011-R10b-SM-5DUXA 22.8
GTEX-13FLW-0011-R10b-SM-5LZZF 22.6
GTEX-13X6J-0011-R10b-SM-5PNWA 22.3
GTEX-QVUS-0011-R10A-SM-3GIK3 22.2
GTEX-NL3H-0011-R10A-SM-2I3E9 21.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 21.8
GTEX-X4XX-0011-R10B-SM-46MWO 21.8
GTEX-XMD1-0011-R10A-SM-4AT4A 21.8
GTEX-WZTO-0011-R10B-SM-4E3KB 21.6
GTEX-131YS-0011-R10b-SM-5EQ5N 21.2
GTEX-13S7M-0011-R10b-SM-5PNZB 21.0
GTEX-T5JC-0011-R10A-SM-32PM2 20.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 20.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 20.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 20.3
GTEX-N7MT-0011-R10A-SM-2I3E1 19.6
GTEX-N7MS-0011-R10A-SM-2HMJK 19.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 19.3
GTEX-13O3Q-0011-R10b-SM-5KM39 19.2
GTEX-13CZV-0011-R10b-SM-5LZYD 19.1
GTEX-145LS-0011-R10a-SM-5PNUQ 19.1
GTEX-QMR6-0011-R10A-SM-32PKO 19.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 18.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 18.7
GTEX-13X6K-0011-R10a-SM-5P9JR 18.7
GTEX-YJ89-0011-R10a-SM-4SOK9 18.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 18.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 18.3
GTEX-13O3O-0011-R10a-SM-5LUA9 18.2
GTEX-XLM4-0011-R10A-SM-4AT5P 18.2
GTEX-13FXS-0011-R10a-SM-5J2MA 18.1
GTEX-13FHO-0011-R10b-SM-5J2MM 18.0
GTEX-13X6I-0011-R10a-SM-5PNWI 18.0
GTEX-131XH-0011-R10a-SM-5EGLJ 17.9
GTEX-12WSM-0011-R10a-SM-5DUWV 17.8
GTEX-13OVL-0011-R10a-SM-5L3GS 17.6
GTEX-147GR-0011-R10b-SM-5S2UM 17.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 17.5
GTEX-14BIN-0011-R10a-SM-5S2UA 17.5
GTEX-12WSD-0011-R10b-SM-5GU79 17.3
GTEX-13G51-0011-R10b-SM-5LZYF 17.2
GTEX-12WSF-0011-R10a-SM-5LZVH 17.1
GTEX-13QIC-0011-R10a-SM-5O9C7 17.0
GTEX-13SLX-0011-R10a-SM-5P9HV 16.5
GTEX-TSE9-0011-R10A-SM-3DB7O 16.4
GTEX-P44H-0011-R10A-SM-2XCEK 16.0
GTEX-ZF28-0011-R10a-SM-4WWEH 15.8
GTEX-12126-0011-R10b-SM-5BC6T 15.6
GTEX-12WSH-0011-R10a-SM-5LZUS 15.6
GTEX-11H98-0011-R10b-SM-5NQ98 15.3
GTEX-13NYB-0011-R10a-SM-5KM43 15.3
GTEX-ZUA1-0011-R10a-SM-51MT6 15.3
GTEX-13N1W-0011-R10b-SM-5MR4H 15.1
GTEX-13OW7-0011-R10a-SM-5L3H3 15.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 14.5
GTEX-OXRN-0011-R10A-SM-2I5GC 14.0
GTEX-Z93S-0011-R10a-SM-4RGNM 13.7
GTEX-13OW8-0011-R10a-SM-5L3H6 13.3
GTEX-11ZUS-0011-R10b-SM-5BC79 13.0
GTEX-13JVG-0011-R10b-SM-5KM2P 12.9
GTEX-14BIL-0011-R10a-SM-5SI75 12.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 12.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.5
GTEX-13JUV-0011-R10b-SM-5LZXR 12.3
GTEX-145LU-0011-R10a-SM-5PNWJ 12.1
GTEX-13NYS-0011-R10a-SM-5MR4S 11.7
GTEX-RVPU-0011-R10A-SM-2XCAH 11.7
GTEX-147F4-0011-R10b-SM-5S2WC 11.3
GTEX-ZVT3-0011-R10b-SM-57WB6 11.2
GTEX-13OW6-0011-R10a-SM-5L3HE 11.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.0
GTEX-X4EP-0011-R10B-SM-4QASJ 11.0
GTEX-13QJC-0011-R10a-SM-5SI63 10.9
GTEX-ZXG5-0011-R10a-SM-57WDD 10.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.7
GTEX-12WSA-0011-R10b-SM-5P9ET 10.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 9.8
GTEX-139TS-0011-R10a-SM-5K7TU 9.7
GTEX-13N2G-0011-R10a-SM-5MR34 9.5
GTEX-X261-0011-R10B-SM-4E3JT 9.5
GTEX-11WQK-0011-R10a-SM-5BC6R 9.2
GTEX-NL4W-0011-R10A-SM-2I3DY 9.1
GTEX-11WQC-0011-R10a-SM-57WCT 8.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 8.1
GTEX-13SLW-0011-R10a-SM-5S2UI 8.0
GTEX-OXRO-0011-R10A-SM-2I5EH 7.4
GTEX-13IVO-0011-R10a-SM-5LZY3 7.1
GTEX-14753-0011-R10b-SM-5S2WE 7.0
GTEX-13NZA-0011-R10b-SM-5KM54 6.7
GTEX-1477Z-0011-R10b-SM-5S2RF 6.6
GTEX-1445S-0011-R10a-SM-5PNWB 6.4
GTEX-ZV68-0011-R10a-SM-51MT7 6.1
GTEX-131XW-0011-R10a-SM-5DUVA 5.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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