Tissue expression of VARS - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	2.3	TPM
GTEx:	18.6	RPKM
FANTOM5:	32.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA046710
Squamous epithelial cells	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	2.3

Female, age 70

Sample 1
TPM: 2.0

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 3.0

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 1.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	18.6

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 18.6

Samples: 286

Max RPKM: 42.4
Min RPKM: 8.2
Std RPKM: 4.8
Median RPKM: 18

GTEX-TMMY-1126-SM-4DXSX

42.4

GTEX-RUSQ-0826-SM-47JWW

36.5

GTEX-13O1R-1326-SM-5IJF5

35.0

GTEX-13X6H-1326-SM-5LU42

32.8

GTEX-13X6I-1026-SM-5LU4C

31.4

GTEX-RU72-0726-SM-46MUW

29.7

GTEX-133LE-0626-SM-5IFFJ

29.0

GTEX-R55D-1126-SM-48FEB

29.0

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	32.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 32.0

FF:10015-101C6

68,74,75 years, mixed

32.0