We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HLA-E
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:91.3RPKM
FANTOM5:145.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA031454

 

Antibody CAB024589

 

Glial cells

Medium   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

91.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 91.3
Samples: 117

Max RPKM: 287.1
Min RPKM: 25
Std RPKM: 46.3
Median RPKM: 82.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 287.1
GTEX-OHPN-0011-R5A-SM-2I5FF 254.3
GTEX-XMD1-0011-R5A-SM-4AT47 240.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 233.6
GTEX-132Q8-0011-R5a-SM-5IJDM 226.7
GTEX-X585-0011-R5A-SM-46MVI 180.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 175.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 158.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 151.1
GTEX-139T8-0011-R5b-SM-5J1MO 150.8
GTEX-QMR6-0011-R5A-SM-32PKT 150.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 146.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 144.6
GTEX-13X6I-0011-R5a-SM-5PNWW 144.2
GTEX-1445S-0011-R5a-SM-5PNUS 138.2
GTEX-13NYS-0011-R5a-SM-5MR4D 131.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 130.6
GTEX-13JVG-0011-R5a-SM-5MR4O 123.2
GTEX-12WSF-0011-R5a-SM-5HL8K 120.9
GTEX-ZVT3-0011-R5a-SM-51MSI 120.9
GTEX-P44H-0011-R5A-SM-2XCEX 120.6
GTEX-13FLV-0011-R5a-SM-5LZWT 119.5
GTEX-N7MT-0011-R5a-SM-2I3G6 119.5
GTEX-13OW6-0011-R5a-SM-5O9BK 119.0
GTEX-139TS-0011-R5b-SM-5J2MZ 118.6
GTEX-11H98-0011-R5b-SM-57WCF 118.0
GTEX-QVJO-0011-R5A-SM-2S1QM 117.6
GTEX-NPJ7-0011-R5a-SM-33HBK 117.1
GTEX-13NZA-0011-R5b-SM-5KM4K 111.8
GTEX-1477Z-0011-R5b-SM-5PNUO 108.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 107.6
GTEX-RVPV-0011-R5A-SM-2TF69 106.1
GTEX-13NYB-0011-R5a-SM-5MR45 105.9
GTEX-13JUV-0011-R5a-SM-5LZY5 105.1
GTEX-X261-0011-R5A-SM-3NMB4 103.8
GTEX-12WSB-0011-R5b-SM-5GU67 103.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 102.2
GTEX-144GL-0011-R5b-SM-5PNUJ 101.5
GTEX-X4XX-0011-R5A-SM-46MWN 97.6
GTEX-1399T-0011-R5b-SM-5IJDK 96.5
GTEX-WL46-0011-R5A-SM-3LK6V 94.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 91.5
GTEX-NL4W-0011-R5a-SM-2I3GD 91.3
GTEX-11UD1-0011-R5b-SM-5P9FP 91.2
GTEX-XOTO-0011-R5A-SM-4B657 90.8
GTEX-R55E-0011-R5A-SM-2TC5N 90.1
GTEX-144GO-0011-R5a-SM-5PNUR 88.6
GTEX-11GSP-0011-R5a-SM-57WBE 88.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 87.4
GTEX-12ZZX-0011-R5a-SM-5HL89 85.5
GTEX-145LS-0011-R5a-SM-5SI65 85.4
GTEX-WWYW-0011-R5A-SM-3NB3E 85.1
GTEX-RVPU-0011-R5A-SM-2XCAD 84.8
GTEX-13FHP-0011-R5b-SM-5LZY2 84.5
GTEX-13X6K-0011-R5b-SM-5PNUE 84.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 83.9
GTEX-RU72-0011-R5A-SM-2TF6U 83.4
GTEX-N7MS-0011-R5a-SM-2HMK8 82.7
GTEX-T5JC-0011-R5A-SM-32PLK 82.2
GTEX-WZTO-0011-R5B-SM-3NMC5 80.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 80.3
GTEX-14BIN-0011-R5b-SM-5SI78 78.6
GTEX-13OW7-0011-R5b-SM-5O9DM 77.2
GTEX-S7PM-0011-R5A-SM-3NM8G 76.0
GTEX-TSE9-0011-R5A-SM-3DB7J 75.3
GTEX-WVLH-0011-R5A-SM-3MJFW 75.1
GTEX-13112-0011-R5b-SM-5DUV8 73.7
GTEX-14ABY-0011-R5b-SM-5SI7B 72.1
GTEX-13SLX-0011-R5a-SM-5O9BV 71.0
GTEX-13OW5-0011-R5b-SM-5L3FR 70.4
GTEX-12WSA-0011-R5b-SM-5GU5I 68.9
GTEX-13OVH-0011-R5b-SM-5KM4L 68.8
GTEX-13CZV-0011-R5a-SM-5K7XA 67.1
GTEX-13G51-0011-R5a-SM-5L3EB 66.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 65.3
GTEX-NL3H-0011-R5a-SM-2I3GB 65.3
GTEX-13O3O-0011-R5b-SM-5KM44 65.1
GTEX-13OVL-0011-R5b-SM-5L3FU 65.0
GTEX-13FLW-0011-R5a-SM-5LZX6 64.9
GTEX-12WSD-0011-R5b-SM-5CVNG 64.8
GTEX-13CF2-0011-R5a-SM-5LZWS 64.8
GTEX-PVOW-0011-R5A-SM-32PL7 64.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 63.4
GTEX-145MH-0011-R5a-SM-5P9JT 63.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 63.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 62.7
GTEX-13VXU-0011-R5a-SM-5O9D7 62.4
GTEX-14BIM-0011-R5b-SM-5S2RM 62.3
GTEX-ZUA1-0011-R5b-SM-51MTG 61.0
GTEX-S7SE-0011-R5A-SM-2XCDA 60.7
GTEX-YFC4-0011-R5a-SM-4RGLR 60.7
GTEX-11NV4-0011-R5a-SM-5NQ88 59.1
GTEX-11WQC-0011-R5a-SM-5BC74 58.0
GTEX-11OF3-0011-R5a-SM-57WB4 57.5
GTEX-ZE7O-0011-R5a-SM-57WBO 56.2
GTEX-13S7M-0011-R5b-SM-5P9HS 56.1
GTEX-12WSH-0011-R5b-SM-5P9F3 56.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 55.8
GTEX-1313W-0011-R5b-SM-5L3EP 54.7
GTEX-13CIG-0011-R5b-SM-5L3F2 53.0
GTEX-131YS-0011-R5b-SM-5K7YB 52.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50.1
GTEX-T6MN-0011-R5A-SM-32QPD 49.4
GTEX-13FXS-0011-R5b-SM-5LZYE 49.3
GTEX-ZV68-0011-R5a-SM-4YCDW 48.9
GTEX-13X6J-0011-R5b-SM-5PNWT 47.5
GTEX-OXRN-0011-R5A-SM-2I5EF 47.5
GTEX-UTHO-0011-R5A-SM-3GIJD 47.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 44.0
GTEX-ZXG5-0011-R5b-SM-57WBN 43.4
GTEX-12WSC-0011-R5b-SM-5CVNS 42.8
GTEX-T2IS-0011-R5A-SM-32QP4 42.2
GTEX-145MG-0011-R5b-SM-5S2VU 41.9
GTEX-YJ89-0011-R5a-SM-4V6GM 35.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 32.2
GTEX-Z93S-0011-R5b-SM-4RGNI 30.8
GTEX-139TT-0011-R5b-SM-5K7W8 25.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

145.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 145.3
FF:10164-103B2 76 years, female 191.4
FF:10379-105H1 89 years, female 99.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.