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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:30.7TPM
GTEx:344.2RPKM
FANTOM5:502.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA031454

 

Antibody CAB024589

 

Glandular cells

Medium   Low  
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

30.7

overview Male, age 65
Sample 1
TPM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 58.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 13.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 50.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

344.2

GTEx sample id

RPKM

238.9320.8445.1122.4728.80100200300400500600700
 
238.9320.8445.1122.4728.80100200300400500600700

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 344.2
Samples: 88

Max RPKM: 728.8
Min RPKM: 122.4
Std RPKM: 127.6
Median RPKM: 320.8
GTEX-WRHK-1026-SM-4MVOD 728.8
GTEX-148VJ-2226-SM-5NQ9M 645.4
GTEX-VUSG-1726-SM-4KKZL 586.4
GTEX-11VI4-1626-SM-5EQKO 573.6
GTEX-13O61-1326-SM-5KM31 570.0
GTEX-145ME-0926-SM-5O9AR 554.2
GTEX-13QBU-1926-SM-5IJEW 550.9
GTEX-11NSD-1726-SM-5N9C3 536.1
GTEX-1399U-2126-SM-5IFEZ 532.6
GTEX-13FH7-1226-SM-5IJFK 520.0
GTEX-WH7G-1626-SM-4LVMY 518.2
GTEX-Z9EW-0926-SM-5CVMM 517.2
GTEX-ZVP2-1726-SM-5GU5P 508.0
GTEX-11P82-0826-SM-5P9GU 498.1
GTEX-14E6E-1626-SM-5RQI7 497.4
GTEX-UPK5-2026-SM-4JBIM 477.6
GTEX-12BJ1-1926-SM-5HL9Z 474.5
GTEX-X15G-1426-SM-4PQZK 471.0
GTEX-WFJO-0926-SM-4LVM2 467.0
GTEX-ZC5H-2326-SM-4WAYT 464.5
GTEX-11XUK-1426-SM-5EQMG 452.8
GTEX-ZLFU-1526-SM-4WWBT 448.9
GTEX-1192X-2526-SM-59868 443.8
GTEX-13FTW-2026-SM-5IJE2 438.7
GTEX-ZVT2-2126-SM-5NQ93 418.6
GTEX-13O21-1026-SM-5IJDU 417.0
GTEX-ZQG8-2526-SM-57WEQ 395.8
GTEX-ZTPG-2626-SM-57WFX 388.1
GTEX-13RTK-0826-SM-5Q5C6 378.2
GTEX-139T6-1026-SM-5IJGC 375.7
GTEX-XAJ8-0526-SM-47JYK 373.9
GTEX-13OVI-1926-SM-5IJCG 370.8
GTEX-Y5LM-1626-SM-4VDTB 370.7
GTEX-13111-1426-SM-5DUW3 368.8
GTEX-13CF3-1226-SM-5LZXN 368.8
GTEX-1399S-2026-SM-5KM4B 360.2
GTEX-ZEX8-1826-SM-57WBH 349.3
GTEX-ZTX8-0526-SM-59HLD 335.6
GTEX-VJYA-0926-SM-4KL1N 331.7
GTEX-131XG-1726-SM-5LZUR 329.9
GTEX-1122O-1326-SM-5H11F 325.7
GTEX-11EQ9-1326-SM-5985X 324.8
GTEX-ZP4G-1626-SM-57WGD 322.9
GTEX-11P7K-1626-SM-5GU63 321.5
GTEX-XXEK-1026-SM-4BRUW 320.0
GTEX-Y114-1426-SM-4TT6W 315.7
GTEX-ZPIC-2326-SM-57WDW 313.4
GTEX-ZA64-1226-SM-5HL7B 305.1
GTEX-13PL7-2626-SM-5IFH4 292.4
GTEX-WFG8-1626-SM-4LVMB 291.4
GTEX-13113-1226-SM-5EGHT 285.8
GTEX-ZZ64-0526-SM-5GZXM 282.6
GTEX-XGQ4-1326-SM-4GIDU 279.7
GTEX-WFG7-1726-SM-4LVME 276.4
GTEX-WEY5-1526-SM-4LMJF 274.7
GTEX-145LT-1026-SM-5LU9O 273.4
GTEX-11DXX-1626-SM-5H11H 271.6
GTEX-ZVZP-1826-SM-5GZXB 271.0
GTEX-XBED-1426-SM-4AT4G 270.6
GTEX-11DXZ-1326-SM-5H11X 253.1
GTEX-XMK1-1826-SM-4B66F 251.8
GTEX-ZXES-1526-SM-5NQ95 245.1
GTEX-ZYWO-1526-SM-5SIAL 241.7
GTEX-XUZC-1426-SM-4BRV3 241.1
GTEX-131XF-1326-SM-5GCMQ 240.6
GTEX-1399R-2026-SM-5K7WN 239.2
GTEX-11I78-1126-SM-5A5K5 238.0
GTEX-139YR-2226-SM-5IFFW 238.0
GTEX-X5EB-1626-SM-4E3IV 237.2
GTEX-ZLV1-1126-SM-4WWBW 235.7
GTEX-14DAR-1426-SM-5RQIR 234.0
GTEX-ZYFG-2026-SM-5E43Y 233.2
GTEX-YB5E-1526-SM-5IFIE 231.6
GTEX-12WSK-1526-SM-5CVNO 228.7
GTEX-13D11-0726-SM-5LZZB 227.8
GTEX-Y3IK-1726-SM-4YCCR 226.7
GTEX-133LE-1426-SM-5IFH1 225.2
GTEX-Y9LG-1626-SM-5IFHM 218.3
GTEX-111CU-1326-SM-5NQ8L 212.6
GTEX-117YX-0326-SM-5GICL 210.9
GTEX-YEC4-1726-SM-4W21E 208.8
GTEX-ZQUD-0926-SM-57WE3 201.8
GTEX-ZTSS-0926-SM-59865 184.9
GTEX-WQUQ-2426-SM-4MVNW 183.9
GTEX-ZF2S-1726-SM-57WFT 171.3
GTEX-YF7O-1826-SM-5IFIU 153.2
GTEX-111YS-1426-SM-5GID8 124.2
GTEX-ZPCL-1726-SM-57WEO 122.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

502.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 502.7
FF:10024-101D6 15,40,85 years, mixed 502.7

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The Human Protein Atlas project is funded
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