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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:38.9RPKM
FANTOM5:120.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA040282

 

Antibody HPA063763

 

Glial cells

Not detected   Medium  

Neuronal cells

High   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

38.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 38.9
Samples: 117

Max RPKM: 59.3
Min RPKM: 20.7
Std RPKM: 7.3
Median RPKM: 38.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 59.3
GTEX-12WSA-0011-R5b-SM-5GU5I 57.5
GTEX-13JVG-0011-R5a-SM-5MR4O 54.3
GTEX-T6MN-0011-R5A-SM-32QPD 53.9
GTEX-T2IS-0011-R5A-SM-32QP4 52.4
GTEX-13NYB-0011-R5a-SM-5MR45 50.8
GTEX-X585-0011-R5A-SM-46MVI 50.3
GTEX-X4XX-0011-R5A-SM-46MWN 49.0
GTEX-PVOW-0011-R5A-SM-32PL7 48.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 48.7
GTEX-X261-0011-R5A-SM-3NMB4 48.5
GTEX-13X6K-0011-R5b-SM-5PNUE 48.1
GTEX-P44H-0011-R5A-SM-2XCEX 47.9
GTEX-13FLV-0011-R5a-SM-5LZWT 47.6
GTEX-ZUA1-0011-R5b-SM-51MTG 46.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 46.7
GTEX-N7MT-0011-R5a-SM-2I3G6 46.7
GTEX-WVLH-0011-R5A-SM-3MJFW 46.7
GTEX-12WSB-0011-R5b-SM-5GU67 46.1
GTEX-N7MS-0011-R5a-SM-2HMK8 45.5
GTEX-WZTO-0011-R5B-SM-3NMC5 45.5
GTEX-13JUV-0011-R5a-SM-5LZY5 45.3
GTEX-11H98-0011-R5b-SM-57WCF 45.2
GTEX-139TT-0011-R5b-SM-5K7W8 45.2
GTEX-WWYW-0011-R5A-SM-3NB3E 44.4
GTEX-TSE9-0011-R5A-SM-3DB7J 44.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 43.7
GTEX-13OW6-0011-R5a-SM-5O9BK 43.6
GTEX-131YS-0011-R5b-SM-5K7YB 43.5
GTEX-13G51-0011-R5a-SM-5L3EB 43.2
GTEX-R55E-0011-R5A-SM-2TC5N 43.2
GTEX-13X6I-0011-R5a-SM-5PNWW 43.1
GTEX-RU72-0011-R5A-SM-2TF6U 43.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 43.0
GTEX-1399T-0011-R5b-SM-5IJDK 42.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 42.0
GTEX-QVJO-0011-R5A-SM-2S1QM 41.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 41.7
GTEX-S7SE-0011-R5A-SM-2XCDA 41.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 41.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 41.2
GTEX-13FXS-0011-R5b-SM-5LZYE 41.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 40.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 40.7
GTEX-12WSC-0011-R5b-SM-5CVNS 40.4
GTEX-132Q8-0011-R5a-SM-5IJDM 40.4
GTEX-NL4W-0011-R5a-SM-2I3GD 40.4
GTEX-12WSF-0011-R5a-SM-5HL8K 40.3
GTEX-UTHO-0011-R5A-SM-3GIJD 40.2
GTEX-11NV4-0011-R5a-SM-5NQ88 40.1
GTEX-13OW7-0011-R5b-SM-5O9DM 40.0
GTEX-11GSP-0011-R5a-SM-57WBE 39.8
GTEX-WL46-0011-R5A-SM-3LK6V 39.5
GTEX-14BIM-0011-R5b-SM-5S2RM 39.4
GTEX-NL3H-0011-R5a-SM-2I3GB 39.4
GTEX-YFC4-0011-R5a-SM-4RGLR 39.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 38.8
GTEX-13O3O-0011-R5b-SM-5KM44 38.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 38.8
GTEX-144GO-0011-R5a-SM-5PNUR 38.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 38.2
GTEX-145LS-0011-R5a-SM-5SI65 38.1
GTEX-13OVH-0011-R5b-SM-5KM4L 38.0
GTEX-1313W-0011-R5b-SM-5L3EP 37.7
GTEX-13VXU-0011-R5a-SM-5O9D7 37.7
GTEX-13FLW-0011-R5a-SM-5LZX6 37.6
GTEX-12ZZX-0011-R5a-SM-5HL89 37.4
GTEX-13OVL-0011-R5b-SM-5L3FU 37.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 37.3
GTEX-13SLX-0011-R5a-SM-5O9BV 37.1
GTEX-13X6J-0011-R5b-SM-5PNWT 37.0
GTEX-QMR6-0011-R5A-SM-32PKT 36.9
GTEX-XOTO-0011-R5A-SM-4B657 36.9
GTEX-145MH-0011-R5a-SM-5P9JT 36.5
GTEX-RVPV-0011-R5A-SM-2TF69 36.5
GTEX-13NYS-0011-R5a-SM-5MR4D 36.4
GTEX-1445S-0011-R5a-SM-5PNUS 36.4
GTEX-ZE7O-0011-R5a-SM-57WBO 36.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 36.4
GTEX-T5JC-0011-R5A-SM-32PLK 36.3
GTEX-NPJ7-0011-R5a-SM-33HBK 36.2
GTEX-ZXG5-0011-R5b-SM-57WBN 35.9
GTEX-11OF3-0011-R5a-SM-57WB4 35.4
GTEX-XMD1-0011-R5A-SM-4AT47 35.2
GTEX-13CZV-0011-R5a-SM-5K7XA 35.0
GTEX-14BIN-0011-R5b-SM-5SI78 34.6
GTEX-OHPN-0011-R5A-SM-2I5FF 34.5
GTEX-14ABY-0011-R5b-SM-5SI7B 34.4
GTEX-13OW5-0011-R5b-SM-5L3FR 34.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 34.1
GTEX-139T8-0011-R5b-SM-5J1MO 34.0
GTEX-11WQC-0011-R5a-SM-5BC74 33.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 33.3
GTEX-Z93S-0011-R5b-SM-4RGNI 33.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 32.8
GTEX-139TS-0011-R5b-SM-5J2MZ 32.8
GTEX-ZV68-0011-R5a-SM-4YCDW 32.3
GTEX-13FHP-0011-R5b-SM-5LZY2 32.1
GTEX-13CIG-0011-R5b-SM-5L3F2 32.0
GTEX-12WSD-0011-R5b-SM-5CVNG 31.9
GTEX-13S7M-0011-R5b-SM-5P9HS 31.8
GTEX-144GL-0011-R5b-SM-5PNUJ 31.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 31.1
GTEX-ZVT3-0011-R5a-SM-51MSI 30.3
GTEX-RVPU-0011-R5A-SM-2XCAD 30.2
GTEX-11UD1-0011-R5b-SM-5P9FP 28.3
GTEX-13112-0011-R5b-SM-5DUV8 28.2
GTEX-OXRN-0011-R5A-SM-2I5EF 27.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 25.7
GTEX-13CF2-0011-R5a-SM-5LZWS 25.5
GTEX-YJ89-0011-R5a-SM-4V6GM 25.2
GTEX-12WSH-0011-R5b-SM-5P9F3 24.3
GTEX-S7PM-0011-R5A-SM-3NM8G 24.1
GTEX-145MG-0011-R5b-SM-5S2VU 22.1
GTEX-13NZA-0011-R5b-SM-5KM4K 20.9
GTEX-1477Z-0011-R5b-SM-5PNUO 20.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

120.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 120.0
FF:10379-105H1 89 years, female 130.6
FF:10164-103B2 76 years, female 109.4

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