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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:107.7TPM
GTEx:46.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA040282

 

Antibody HPA063763

 

Endothelial cells

Not detected   Low  

Glial cells

Not detected   Low  

Neuronal cells

High   Medium  

Neuropil

Not detected   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

107.7

N/A Male, age 5
Sample 1
TPM: 83.2
overview Female, age 40
Sample 2
TPM: 140.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 99.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

46.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 47.8
Samples: 114

Max RPKM: 66.2
Min RPKM: 24.7
Std RPKM: 6.7
Median RPKM: 49
GTEX-PVOW-2526-SM-2XCF7 66.2
GTEX-QDT8-2926-SM-32PKC 63.4
GTEX-WVLH-3026-SM-3MJG9 60.3
GTEX-13OVJ-2826-SM-5L3GW 59.4
GTEX-13FHO-3026-SM-5J1O9 58.3
GTEX-RNOR-2326-SM-2TF4I 58.3
GTEX-13NYB-3026-SM-5IJD7 58.0
GTEX-T6MN-2626-SM-32PMQ 57.0
GTEX-144FL-3026-SM-5O99C 56.3
GTEX-TSE9-3026-SM-3DB76 55.8
GTEX-13OW6-3026-SM-5J2MI 55.6
GTEX-111FC-3126-SM-5GZZ2 55.1
GTEX-13OW8-2826-SM-5L3GC 54.7
GTEX-13FHP-3026-SM-5IJBS 54.0
GTEX-11OC5-0726-SM-5P9JK 53.8
GTEX-13VXU-2926-SM-5LU5C 53.8
GTEX-13FLW-1426-SM-5K7YE 53.4
GTEX-13O3Q-2926-SM-5KM45 53.3
GTEX-T2IS-3026-SM-32QPM 53.2
GTEX-12ZZY-3026-SM-5GCOU 52.9
GTEX-14BMV-3026-SM-5S2PQ 52.9
GTEX-X585-3026-SM-46MWF 52.8
GTEX-UTHO-3026-SM-3GAFB 52.7
GTEX-X4XX-3026-SM-3NMB2 52.7
GTEX-WZTO-2926-SM-3NM9I 52.5
GTEX-QVUS-2826-SM-3GADB 52.0
GTEX-12WSC-3026-SM-5GCNF 51.9
GTEX-145MF-2726-SM-5O995 51.8
GTEX-145MH-3026-SM-5Q5DZ 51.8
GTEX-ZAK1-3026-SM-5S2MJ 51.8
GTEX-13G51-3026-SM-5IJB8 51.7
GTEX-QVJO-1426-SM-2S1QY 51.6
GTEX-13FXS-3126-SM-5J2NN 51.3
GTEX-T5JC-2426-SM-3NMDB 51.3
GTEX-11OF3-2926-SM-5HL78 51.2
GTEX-145MG-3026-SM-5RQJA 51.2
GTEX-14A5I-2926-SM-5Q5CQ 51.0
GTEX-13SLX-3126-SM-5S2Q5 50.9
GTEX-Q2AG-2926-SM-2HMJ3 50.8
GTEX-QMR6-1426-SM-32PLA 50.5
GTEX-1192X-3126-SM-5N9BY 50.4
GTEX-11GSO-2926-SM-5HL73 50.4
GTEX-11NUK-2926-SM-5A5MD 50.3
GTEX-XLM4-3026-SM-4AT6L 50.2
GTEX-11DXY-3226-SM-5GIDE 50.1
GTEX-11ONC-2926-SM-5P9JM 50.1
GTEX-12ZZX-2926-SM-5GCOQ 50.1
GTEX-12ZZZ-3026-SM-5BC67 49.8
GTEX-144GL-3026-SM-5Q5CW 49.7
GTEX-YFC4-3126-SM-5PNV6 49.7
GTEX-NPJ8-1526-SM-2D7VU 49.6
GTEX-14ASI-3026-SM-5S2PN 49.5
GTEX-11DXW-1126-SM-5H12Q 49.4
GTEX-WL46-2926-SM-3LK82 49.4
GTEX-YJ89-3026-SM-5IFJI 49.4
GTEX-131YS-3126-SM-5KLYT 49.3
GTEX-11GS4-3126-SM-5A5LH 49.0
GTEX-NPJ7-2726-SM-2I3FT 49.0
GTEX-12126-1026-SM-5P9JJ 48.9
GTEX-WHSE-3026-SM-3P5ZH 48.5
GTEX-117XS-3026-SM-5N9CA 48.4
GTEX-1399T-3026-SM-5KLZC 48.3
GTEX-13OVH-3026-SM-5MR4N 48.3
GTEX-XOTO-3026-SM-4B65M 48.2
GTEX-13JVG-3126-SM-5L3FH 48.1
GTEX-Y111-2726-SM-4TT3N 47.5
GTEX-RU72-3026-SM-5SI7Y 47.4
GTEX-ZYFD-3026-SM-5E44C 47.4
GTEX-R55F-1326-SM-5S2V4 47.1
GTEX-WWYW-3126-SM-3NB39 46.8
GTEX-13QIC-2926-SM-5J2NF 46.7
GTEX-11PRG-2926-SM-5987A 46.6
GTEX-ZUA1-3026-SM-59HJC 46.5
GTEX-ZVT3-3026-SM-5E43N 46.1
GTEX-1313W-3126-SM-5LZUI 46.0
GTEX-1117F-3226-SM-5N9CT 45.7
GTEX-145LS-3126-SM-5Q5BY 45.5
GTEX-N7MT-1126-SM-5SI7V 45.2
GTEX-Y8DK-0826-SM-4TT3T 45.1
GTEX-ZE7O-3126-SM-5HL5X 45.1
GTEX-ZZPT-3026-SM-5GZXH 45.0
GTEX-13X6J-3026-SM-5Q5CU 44.6
GTEX-OXRN-2426-SM-2I5EQ 44.4
GTEX-13O3O-3126-SM-5KM3H 44.2
GTEX-11EI6-3026-SM-5GZZO 43.8
GTEX-13S7M-3126-SM-5RQJQ 43.8
GTEX-12ZZW-2926-SM-5LZUP 43.7
GTEX-1445S-3026-SM-5O9BR 43.4
GTEX-1128S-2726-SM-5H12C 43.2
GTEX-13NYC-2826-SM-5K7WR 42.7
GTEX-13PL6-3126-SM-5LUAR 42.7
GTEX-12WSD-3126-SM-5HL7P 42.6
GTEX-13X6K-2926-SM-5Q5D5 42.6
GTEX-11O72-2926-SM-5BC4V 42.2
GTEX-Z93S-2926-SM-57WB9 42.1
GTEX-11ZUS-2926-SM-5FQSL 42.0
GTEX-13PVQ-3026-SM-5SI93 41.5
GTEX-ZAJG-3126-SM-5HL9J 41.4
GTEX-11EMC-3226-SM-5EGKW 41.1
GTEX-131XW-3126-SM-5LZUC 41.1
GTEX-11WQK-3026-SM-5EQL6 41.0
GTEX-13OW7-3026-SM-5L3GY 40.8
GTEX-12WSH-3026-SM-5CVNI 39.7
GTEX-147GR-3026-SM-5S2ML 39.3
GTEX-132Q8-3026-SM-5PNVG 38.6
GTEX-13NYS-3126-SM-5KLYV 38.6
GTEX-13JUV-2926-SM-5LZX7 38.2
GTEX-PWO3-0926-SM-2I5EY 36.2
GTEX-11GSP-3226-SM-5986O 36.1
GTEX-13IVO-2926-SM-5L3CZ 35.0
GTEX-139T8-1026-SM-5J2MC 32.3
GTEX-11TTK-2926-SM-5PNYP 31.2
GTEX-11NV4-2126-SM-5N9DS 27.4
GTEX-12WSA-2926-SM-5EQ4D 24.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 44.4
Samples: 108

Max RPKM: 74.3
Min RPKM: 21.3
Std RPKM: 8.1
Median RPKM: 46
GTEX-X4EP-0011-R10B-SM-4QASJ 74.3
GTEX-13N2G-0011-R10a-SM-5MR34 65.9
GTEX-12WSD-0011-R10b-SM-5GU79 59.4
GTEX-T6MN-0011-R10A-SM-32QP7 58.5
GTEX-S7SE-0011-R10A-SM-2XCDF 57.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 56.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 55.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 53.9
GTEX-12WSC-0011-R10a-SM-5GU57 53.8
GTEX-145MG-0011-R10a-SM-5PNWG 53.5
GTEX-QDT8-0011-R10A-SM-32PKG 53.3
GTEX-13O3Q-0011-R10b-SM-5KM39 53.2
GTEX-QVUS-0011-R10A-SM-3GIK3 53.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 53.0
GTEX-13FLW-0011-R10b-SM-5LZZF 52.1
GTEX-WVLH-0011-R10A-SM-3MJFM 51.8
GTEX-147GR-0011-R10b-SM-5S2UM 51.7
GTEX-11H98-0011-R10b-SM-5NQ98 51.4
GTEX-WL46-0011-R10A-SM-3MJFQ 51.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 50.1
GTEX-13QJC-0011-R10a-SM-5SI63 49.8
GTEX-13OW6-0011-R10a-SM-5L3HE 49.6
GTEX-X4XX-0011-R10B-SM-46MWO 49.6
GTEX-13X6K-0011-R10a-SM-5P9JR 49.5
GTEX-14BIL-0011-R10a-SM-5SI75 49.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 49.3
GTEX-12WSF-0011-R10a-SM-5LZVH 49.1
GTEX-13FXS-0011-R10a-SM-5J2MA 48.8
GTEX-145MH-0011-R10b-SM-5PNUK 48.8
GTEX-131YS-0011-R10b-SM-5EQ5N 48.2
GTEX-X585-0011-R10A-SM-46MUY 48.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 48.2
GTEX-P44H-0011-R10A-SM-2XCEK 48.1
GTEX-WWYW-0011-R10A-SM-3NB35 48.1
GTEX-13O3O-0011-R10a-SM-5LUA9 47.9
GTEX-12WSE-0011-R10b-SM-5P9JV 47.7
GTEX-13NYB-0011-R10a-SM-5KM43 47.3
GTEX-12WSM-0011-R10a-SM-5DUWV 47.1
GTEX-XLM4-0011-R10A-SM-4AT5P 47.1
GTEX-T5JC-0011-R10A-SM-32PM2 47.0
GTEX-13OW7-0011-R10a-SM-5L3H3 46.9
GTEX-13SLX-0011-R10a-SM-5P9HV 46.9
GTEX-14BIN-0011-R10a-SM-5S2UA 46.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 46.9
GTEX-13N1W-0011-R10b-SM-5MR4H 46.8
GTEX-13QIC-0011-R10a-SM-5O9C7 46.8
GTEX-TSE9-0011-R10A-SM-3DB7O 46.8
GTEX-YFC4-0011-R10a-SM-4SOK5 46.8
GTEX-13S7M-0011-R10b-SM-5PNZB 46.6
GTEX-WZTO-0011-R10B-SM-4E3KB 46.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 46.3
GTEX-13FHO-0011-R10b-SM-5J2MM 46.3
GTEX-145LU-0011-R10a-SM-5PNWJ 46.3
GTEX-13CZV-0011-R10b-SM-5LZYD 46.2
GTEX-1313W-0011-R10b-SM-5DUXA 45.7
GTEX-13JUV-0011-R10b-SM-5LZXR 45.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 45.6
GTEX-N7MT-0011-R10A-SM-2I3E1 45.3
GTEX-YJ89-0011-R10a-SM-4SOK9 45.2
GTEX-13X6J-0011-R10b-SM-5PNWA 44.9
GTEX-QMR6-0011-R10A-SM-32PKO 44.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 44.5
GTEX-131XH-0011-R10a-SM-5EGLJ 44.4
GTEX-N7MS-0011-R10A-SM-2HMJK 44.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 44.1
GTEX-13OVL-0011-R10a-SM-5L3GS 43.8
GTEX-13NYS-0011-R10a-SM-5MR4S 43.7
GTEX-ZUA1-0011-R10a-SM-51MT6 43.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 42.9
GTEX-1445S-0011-R10a-SM-5PNWB 42.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 41.8
GTEX-13OW8-0011-R10a-SM-5L3H6 41.7
GTEX-12WSH-0011-R10a-SM-5LZUS 41.2
GTEX-12126-0011-R10b-SM-5BC6T 41.1
GTEX-13JVG-0011-R10b-SM-5KM2P 41.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 40.9
GTEX-147F4-0011-R10b-SM-5S2WC 40.7
GTEX-X261-0011-R10B-SM-4E3JT 40.5
GTEX-13X6I-0011-R10a-SM-5PNWI 39.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 39.3
GTEX-13G51-0011-R10b-SM-5LZYF 39.3
GTEX-XMD1-0011-R10A-SM-4AT4A 39.3
GTEX-RVPU-0011-R10A-SM-2XCAH 39.1
GTEX-NL3H-0011-R10A-SM-2I3E9 39.0
GTEX-11WQC-0011-R10a-SM-57WCT 38.3
GTEX-ZVT3-0011-R10b-SM-57WB6 37.7
GTEX-145LS-0011-R10a-SM-5PNUQ 37.6
GTEX-11ZUS-0011-R10b-SM-5BC79 37.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 37.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 36.3
GTEX-Z93S-0011-R10a-SM-4RGNM 36.3
GTEX-13SLW-0011-R10a-SM-5S2UI 35.9
GTEX-OXRN-0011-R10A-SM-2I5GC 35.4
GTEX-139TS-0011-R10a-SM-5K7TU 34.5
GTEX-ZF28-0011-R10a-SM-4WWEH 34.4
GTEX-11WQK-0011-R10a-SM-5BC6R 34.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 34.0
GTEX-NL4W-0011-R10A-SM-2I3DY 33.5
GTEX-131XW-0011-R10a-SM-5DUVA 32.3
GTEX-ZV68-0011-R10a-SM-51MT7 32.1
GTEX-OXRO-0011-R10A-SM-2I5EH 31.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 31.0
GTEX-14753-0011-R10b-SM-5S2WE 29.9
GTEX-12WSA-0011-R10b-SM-5P9ET 28.8
GTEX-ZXG5-0011-R10a-SM-57WDD 28.3
GTEX-13NZA-0011-R10b-SM-5KM54 28.0
GTEX-1477Z-0011-R10b-SM-5S2RF 27.3
GTEX-13IVO-0011-R10a-SM-5LZY3 21.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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