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TMX2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:71.1TPM
GTEx:42.3RPKM
FANTOM5:88.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA040282

  

Antibody HPA063763

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

71.1
overview Male, age 54
Sample 1
TPM: 55.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 65.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 61.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 76.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 48.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 79.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 102.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 80.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 64.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 83.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 81.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 68.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 56.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

42.3

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 31.9
Samples: 149

Max RPKM: 55.6
Min RPKM: 17
Std RPKM: 5.5
Median RPKM: 31.2
GTEX-13O1R-2426-SM-5KLZZ 55.6
GTEX-ZTTD-2626-SM-57WEX 53.5
GTEX-147GR-2826-SM-5RQK8 45.8
GTEX-11TT1-0926-SM-5GU5M 43.5
GTEX-1399U-2226-SM-5KLZI 42.4
GTEX-14C39-1626-SM-5S2P4 41.6
GTEX-WQUQ-2626-SM-4MVNP 41.6
GTEX-139D8-2926-SM-5IJBM 41.1
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 50.2
Samples: 196

Max RPKM: 98
Min RPKM: 10.6
Std RPKM: 15.8
Median RPKM: 49.4
GTEX-U4B1-1126-SM-4DXV3 98.0
GTEX-1399R-2226-SM-5P9JB 96.0
GTEX-T5JW-1126-SM-4DM5V 89.7
GTEX-PLZ5-1126-SM-3P613 89.2
GTEX-XV7Q-2126-SM-4BRVX 83.5
GTEX-PWOO-1326-SM-48TCJ 80.3
GTEX-111CU-1426-SM-5GZYP 79.6
GTEX-11TT1-1026-SM-5PNW7 79.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

88.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 88.8
FF:10014-101C5 62,83,84 years, mixed 88.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.