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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:30.5TPM
GTEx:3.4RPKM
FANTOM5:16.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA021324

 

Antibody HPA029915

 

Antibody HPA051038

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Medium   Not detected  

Myoepithelial cells

Not detected   Not detected   Not detected  
     
     
     

BREAST - HPA RNA-seq

Average TPM

30.5

overview Female, age 52
Sample 1
TPM: 15.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 2.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 74.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 29.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

3.4

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 3.4
Samples: 214

Max RPKM: 29.3
Min RPKM: 0.1
Std RPKM: 4
Median RPKM: 2.3
GTEX-14ABY-2126-SM-5QGQZ 29.3
GTEX-U3ZH-1426-SM-4DXSR 26.7
GTEX-XUZC-1626-SM-4BRVP 17.8
GTEX-T2IS-1526-SM-32QPR 16.3
GTEX-T5JC-2126-SM-32PMO 15.8
GTEX-11DXW-0626-SM-5N9ER 15.5
GTEX-ZC5H-2626-SM-5J2MG 14.3
GTEX-QDT8-0626-SM-48TYW 11.2
GTEX-Y3IK-2326-SM-4WWDT 10.7
GTEX-ZF29-1926-SM-5S2P1 10.4
GTEX-ZZPU-0626-SM-5E43T 10.2
GTEX-11EM3-1326-SM-5N9C6 10.1
GTEX-13N11-1726-SM-5J1OJ 10.1
GTEX-Y5V5-2126-SM-4WWFO 10.0
GTEX-ZF2S-2026-SM-5E461 9.6
GTEX-ZXES-0826-SM-5E43C 9.1
GTEX-13QIC-2326-SM-5LU5N 9.0
GTEX-ZVTK-0326-SM-51MRR 8.9
GTEX-139T8-0826-SM-5L3DE 8.7
GTEX-13PL6-2926-SM-5L3I2 8.1
GTEX-T6MO-0326-SM-32QOK 8.1
GTEX-WYVS-1726-SM-3NMAY 8.1
GTEX-12ZZX-1126-SM-5EGKB 8.0
GTEX-S4P3-1326-SM-4AD6V 7.8
GTEX-131YS-0626-SM-5EGKL 7.7
GTEX-SIU7-1626-SM-4BRUK 7.3
GTEX-WYBS-0926-SM-3NM94 7.2
GTEX-11P81-1926-SM-5BC53 7.1
GTEX-1269C-2426-SM-5FQSN 7.1
GTEX-YFC4-1426-SM-5IFJG 6.8
GTEX-ZU9S-1926-SM-5NQBP 6.5
GTEX-RWS6-1926-SM-47JXY 6.2
GTEX-147F4-2826-SM-5NQBN 6.1
GTEX-T5JW-2026-SM-4DM63 6.1
GTEX-132Q8-1426-SM-5EGK7 5.9
GTEX-U3ZN-1926-SM-4DXSG 5.9
GTEX-13FTY-2226-SM-5J1ND 5.8
GTEX-TML8-1226-SM-32QON 5.8
GTEX-1399U-1826-SM-5PNZ1 5.6
GTEX-ZVE2-1226-SM-5NQ8R 5.5
GTEX-131XW-0726-SM-5EGK3 5.4
GTEX-R3RS-0626-SM-48FE1 5.4
GTEX-T6MN-0726-SM-32PML 5.4
GTEX-11PRG-0826-SM-5EQ6A 5.2
GTEX-14AS3-1626-SM-5S2OY 5.2
GTEX-XOT4-0726-SM-4GIAW 5.2
GTEX-11P7K-0726-SM-5EGKX 5.1
GTEX-W5X1-2326-SM-3GIL6 5.0
GTEX-X15G-1626-SM-3NMB3 5.0
GTEX-1192X-2326-SM-5987X 4.9
GTEX-1314G-1226-SM-5BC6D 4.9
GTEX-13CF2-2026-SM-5K7VI 4.9
GTEX-TMMY-0726-SM-33HBE 4.9
GTEX-11DXZ-1926-SM-5GZZL 4.5
GTEX-13113-1726-SM-5GCOO 4.5
GTEX-13OW5-2226-SM-5L3HC 4.5
GTEX-Q2AG-0326-SM-48U1O 4.2
GTEX-T2YK-2226-SM-32QPT 4.2
GTEX-WRHU-0326-SM-3MJFY 4.1
GTEX-TKQ1-0226-SM-33HB5 4.0
GTEX-ZF3C-2326-SM-5S2MZ 4.0
GTEX-UJHI-1426-SM-3DB9C 3.9
GTEX-UPK5-2326-SM-3P5Z8 3.9
GTEX-R55F-1726-SM-2TF4R 3.8
GTEX-RU72-0626-SM-46MUI 3.8
GTEX-13O3P-0826-SM-5L3DH 3.7
GTEX-111YS-1926-SM-5GICC 3.6
GTEX-13FHO-0826-SM-5L3E8 3.6
GTEX-S4UY-0726-SM-4AD6X 3.6
GTEX-ZEX8-2226-SM-57WC6 3.6
GTEX-11EI6-0626-SM-5985T 3.5
GTEX-133LE-1726-SM-5K7VQ 3.5
GTEX-WXYG-2226-SM-4E3IM 3.5
GTEX-XUW1-2326-SM-4BOO5 3.5
GTEX-XUJ4-1926-SM-4BOOV 3.4
GTEX-11WQC-1726-SM-5GU4W 3.3
GTEX-13W3W-1226-SM-5LU4H 3.3
GTEX-SE5C-2126-SM-4BRUJ 3.3
GTEX-1313W-0826-SM-5EQ4T 3.2
GTEX-13NZ8-0126-SM-5IJCT 3.2
GTEX-13NZB-2126-SM-5MR4Y 3.2
GTEX-WYJK-1326-SM-3NB2T 3.1
GTEX-XMD2-0926-SM-4WWEF 3.1
GTEX-XYKS-1326-SM-4BRUN 3.0
GTEX-Y114-2026-SM-4TT7L 3.0
GTEX-ZY6K-1626-SM-5GZWV 3.0
GTEX-1122O-1226-SM-5H113 2.9
GTEX-11EMC-2026-SM-5A5JV 2.9
GTEX-VJWN-0726-SM-3GIJ8 2.9
GTEX-XV7Q-2326-SM-4BRVZ 2.9
GTEX-Y5LM-1726-SM-4VDSX 2.9
GTEX-ZLV1-1426-SM-4WWES 2.9
GTEX-13O3O-0826-SM-5K7WE 2.8
GTEX-R53T-1526-SM-48FEK 2.8
GTEX-Y111-2026-SM-4SOJA 2.8
GTEX-ZPIC-1126-SM-5BC7F 2.8
GTEX-ZVZQ-0826-SM-51MRF 2.8
GTEX-11EQ9-1826-SM-5Q5AJ 2.7
GTEX-13NZ9-1026-SM-5MR5K 2.7
GTEX-X4EP-2926-SM-3P5YQ 2.7
GTEX-ZVT2-1826-SM-5NQ8W 2.7
GTEX-QVJO-1826-SM-447C9 2.6
GTEX-ZVT4-1026-SM-57WC4 2.6
GTEX-VUSG-2226-SM-4KKZO 2.5
GTEX-11TT1-2126-SM-5GU5Y 2.4
GTEX-13OW8-0226-SM-5K7UP 2.4
GTEX-11GS4-2126-SM-5A5KR 2.3
GTEX-13D11-1026-SM-5IJFB 2.3
GTEX-S341-1526-SM-4AD6K 2.3
GTEX-ZAJG-0626-SM-5HL8X 2.3
GTEX-ZTX8-1226-SM-4YCE9 2.3
GTEX-Y8LW-1626-SM-5IFHX 2.2
GTEX-145LT-0726-SM-5S2VM 2.1
GTEX-YJ8O-2226-SM-5IFHW 2.1
GTEX-ZV7C-1826-SM-5NQ83 2.1
GTEX-QEL4-2126-SM-447AE 2.0
GTEX-WI4N-1426-SM-3LK7H 1.9
GTEX-XMD1-0826-SM-4AT52 1.9
GTEX-1211K-1926-SM-5EQLB 1.8
GTEX-144GL-2026-SM-5LU3O 1.8
GTEX-ZYWO-2326-SM-5GZY4 1.8
GTEX-11NV4-2026-SM-5N9DG 1.7
GTEX-146FH-0826-SM-5SI8T 1.7
GTEX-YB5K-1626-SM-5IFIN 1.7
GTEX-XBED-1626-SM-47JYN 1.6
GTEX-11ONC-2126-SM-5HL6E 1.5
GTEX-1117F-2826-SM-5GZXL 1.4
GTEX-11DXY-2326-SM-5GICW 1.4
GTEX-12WSK-2226-SM-5GCO5 1.4
GTEX-139TU-0626-SM-5KM3X 1.4
GTEX-WOFL-0826-SM-3MJG1 1.4
GTEX-ZTTD-1026-SM-51MRD 1.4
GTEX-ZYFC-0826-SM-5E44K 1.4
GTEX-11OF3-1926-SM-59889 1.3
GTEX-TKQ2-1826-SM-33HB2 1.3
GTEX-ZUA1-1526-SM-59HLS 1.3
GTEX-ZYT6-0126-SM-5E45J 1.3
GTEX-11I78-2226-SM-5PNYA 1.2
GTEX-12WSN-1326-SM-5GCNT 1.2
GTEX-WY7C-2726-SM-3NB3P 1.2
GTEX-XQ3S-1326-SM-4BOPQ 1.2
GTEX-ZDXO-0126-SM-5S2ND 1.2
GTEX-U412-1826-SM-4DXTJ 1.1
GTEX-Y3I4-1526-SM-4TT7K 1.1
GTEX-117XS-1926-SM-5GICO 1.0
GTEX-11WQK-2426-SM-5GU5C 1.0
GTEX-145ME-1526-SM-5Q5F2 1.0
GTEX-X261-0626-SM-3NMD9 1.0
GTEX-11NSD-0926-SM-5N9DR 0.9
GTEX-11ZUS-0826-SM-5FQUY 0.9
GTEX-12WSB-0626-SM-59HJO 0.9
GTEX-12WSM-1726-SM-5BC6J 0.9
GTEX-13O3Q-2226-SM-5KM4O 0.9
GTEX-145MO-0826-SM-5NQBL 0.9
GTEX-S33H-0326-SM-4AD6N 0.9
GTEX-11GSO-1926-SM-5A5K3 0.8
GTEX-13PVQ-1026-SM-5KM3M 0.8
GTEX-13W46-0826-SM-5LU3H 0.8
GTEX-PSDG-1626-SM-48TCQ 0.8
GTEX-S7SE-0826-SM-4AT4D 0.8
GTEX-117YX-1426-SM-5H12H 0.7
GTEX-11O72-2126-SM-5N9FO 0.7
GTEX-QEG5-0726-SM-4R1JQ 0.7
GTEX-WFON-1826-SM-3GILG 0.7
GTEX-132AR-0826-SM-5EGK6 0.6
GTEX-13S86-1226-SM-5S2OA 0.6
GTEX-145MN-1926-SM-5SIAI 0.6
GTEX-XMK1-1126-SM-4IHJ8 0.6
GTEX-XQ8I-2426-SM-4WAXY 0.6
GTEX-ZAB4-2526-SM-5HL8M 0.6
GTEX-ZYW4-0826-SM-5GIDG 0.6
GTEX-11TUW-1826-SM-5BC5D 0.5
GTEX-132NY-0826-SM-5K7Y7 0.5
GTEX-13N1W-0626-SM-5MR4U 0.5
GTEX-14E6E-1326-SM-5S2NR 0.5
GTEX-QMRM-1626-SM-4R1KV 0.5
GTEX-S4Q7-1126-SM-4AD6R 0.5
GTEX-UTHO-1026-SM-3GAF7 0.5
GTEX-YB5E-1726-SM-5IFJ3 0.5
GTEX-YEC3-1026-SM-5IFI5 0.5
GTEX-YFCO-1826-SM-4W1YH 0.5
GTEX-ZV6S-1826-SM-5NQ8D 0.5
GTEX-ZWKS-2826-SM-5NQ74 0.5
GTEX-11DZ1-0326-SM-5N9BN 0.4
GTEX-11ZTT-2326-SM-5EQLG 0.4
GTEX-12KS4-0126-SM-5Q5A5 0.4
GTEX-139T6-1626-SM-5PNYZ 0.4
GTEX-144GM-0926-SM-5O994 0.4
GTEX-14753-2426-SM-5LU8U 0.4
GTEX-RUSQ-2026-SM-4GIAK 0.4
GTEX-Y8E4-1626-SM-5S2MW 0.4
GTEX-ZLFU-2126-SM-4WWEV 0.4
GTEX-ZQG8-0726-SM-5P9H9 0.4
GTEX-ZQUD-1926-SM-51MSA 0.4
GTEX-11LCK-2426-SM-5HL5F 0.3
GTEX-11P82-1326-SM-5HL62 0.3
GTEX-13CF3-2126-SM-5IFJP 0.3
GTEX-13FTX-1126-SM-5N9EN 0.3
GTEX-R55D-0826-SM-48FEA 0.3
GTEX-X4XY-0926-SM-4E3JD 0.3
GTEX-XGQ4-0926-SM-4AT4U 0.3
GTEX-Y9LG-1426-SM-5IFJZ 0.3
GTEX-ZDTT-2126-SM-5S2OJ 0.3
GTEX-12BJ1-1826-SM-5HL9N 0.2
GTEX-13O61-1826-SM-5KM4I 0.2
GTEX-REY6-2426-SM-48FF5 0.2
GTEX-S32W-2026-SM-4AD6E 0.2
GTEX-ZDYS-1126-SM-5K7UB 0.2
GTEX-ZT9W-2026-SM-51MRA 0.2
GTEX-ZZ64-1226-SM-5E43R 0.2
GTEX-13FTW-1426-SM-5LZWZ 0.1
GTEX-U8XE-0826-SM-4E3J1 0.1
GTEX-Y5V6-2126-SM-4WWFX 0.1
GTEX-ZA64-1526-SM-5CVMD 0.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

16.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 16.4
FF:10080-102A8 77 years, female 16.4

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