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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:101.1TPM
GTEx:37.4RPKM
FANTOM5:223.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA062452

 

Antibody HPA063471

 

Glandular cells

High   Not detected  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

101.1

overview Male, age 65
Sample 1
TPM: 95.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 122.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 75.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 110.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

37.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 37.4
Samples: 88

Max RPKM: 107.6
Min RPKM: 0.7
Std RPKM: 26.4
Median RPKM: 34.3
GTEX-111YS-1426-SM-5GID8 107.6
GTEX-13FTW-2026-SM-5IJE2 90.1
GTEX-1122O-1326-SM-5H11F 85.5
GTEX-ZTSS-0926-SM-59865 84.4
GTEX-ZPCL-1726-SM-57WEO 83.7
GTEX-YEC4-1726-SM-4W21E 82.4
GTEX-ZVZP-1826-SM-5GZXB 81.5
GTEX-14DAR-1426-SM-5RQIR 80.5
GTEX-13D11-0726-SM-5LZZB 78.4
GTEX-YF7O-1826-SM-5IFIU 74.4
GTEX-ZA64-1226-SM-5HL7B 72.5
GTEX-11I78-1126-SM-5A5K5 71.9
GTEX-YB5E-1526-SM-5IFIE 71.6
GTEX-11DXX-1626-SM-5H11H 70.2
GTEX-ZTX8-0526-SM-59HLD 67.8
GTEX-1399S-2026-SM-5KM4B 66.0
GTEX-ZZ64-0526-SM-5GZXM 65.7
GTEX-ZLV1-1126-SM-4WWBW 64.3
GTEX-11EQ9-1326-SM-5985X 63.1
GTEX-Y9LG-1626-SM-5IFHM 61.6
GTEX-XUZC-1426-SM-4BRV3 57.9
GTEX-X5EB-1626-SM-4E3IV 55.6
GTEX-ZXES-1526-SM-5NQ95 54.3
GTEX-131XF-1326-SM-5GCMQ 53.8
GTEX-ZYFG-2026-SM-5E43Y 53.1
GTEX-XBED-1426-SM-4AT4G 51.2
GTEX-13CF3-1226-SM-5LZXN 50.2
GTEX-145LT-1026-SM-5LU9O 49.7
GTEX-13PL7-2626-SM-5IFH4 48.7
GTEX-11DXZ-1326-SM-5H11X 48.5
GTEX-XXEK-1026-SM-4BRUW 47.9
GTEX-ZVT2-2126-SM-5NQ93 46.7
GTEX-139T6-1026-SM-5IJGC 45.9
GTEX-13113-1226-SM-5EGHT 45.2
GTEX-ZYWO-1526-SM-5SIAL 43.2
GTEX-XGQ4-1326-SM-4GIDU 42.3
GTEX-WQUQ-2426-SM-4MVNW 42.1
GTEX-11P7K-1626-SM-5GU63 41.4
GTEX-133LE-1426-SM-5IFH1 39.7
GTEX-139YR-2226-SM-5IFFW 37.0
GTEX-14E6E-1626-SM-5RQI7 35.9
GTEX-ZLFU-1526-SM-4WWBT 35.2
GTEX-ZVP2-1726-SM-5GU5P 35.2
GTEX-1399R-2026-SM-5K7WN 35.0
GTEX-12BJ1-1926-SM-5HL9Z 33.6
GTEX-ZTPG-2626-SM-57WFX 31.2
GTEX-13RTK-0826-SM-5Q5C6 31.0
GTEX-Y114-1426-SM-4TT6W 30.6
GTEX-Y5LM-1626-SM-4VDTB 30.3
GTEX-VJYA-0926-SM-4KL1N 30.1
GTEX-1399U-2126-SM-5IFEZ 29.9
GTEX-13FH7-1226-SM-5IJFK 28.9
GTEX-ZEX8-1826-SM-57WBH 28.4
GTEX-11XUK-1426-SM-5EQMG 27.3
GTEX-ZPIC-2326-SM-57WDW 26.2
GTEX-11P82-0826-SM-5P9GU 25.8
GTEX-13O61-1326-SM-5KM31 25.0
GTEX-XAJ8-0526-SM-47JYK 24.7
GTEX-WH7G-1626-SM-4LVMY 19.6
GTEX-WFJO-0926-SM-4LVM2 18.2
GTEX-WFG7-1726-SM-4LVME 17.8
GTEX-131XG-1726-SM-5LZUR 17.5
GTEX-11NSD-1726-SM-5N9C3 16.7
GTEX-WFG8-1626-SM-4LVMB 15.8
GTEX-ZP4G-1626-SM-57WGD 15.3
GTEX-Z9EW-0926-SM-5CVMM 14.9
GTEX-Y3IK-1726-SM-4YCCR 14.8
GTEX-13O21-1026-SM-5IJDU 14.2
GTEX-WRHK-1026-SM-4MVOD 13.8
GTEX-11VI4-1626-SM-5EQKO 12.7
GTEX-XMK1-1826-SM-4B66F 8.7
GTEX-X15G-1426-SM-4PQZK 8.5
GTEX-13QBU-1926-SM-5IJEW 7.9
GTEX-12WSK-1526-SM-5CVNO 7.8
GTEX-145ME-0926-SM-5O9AR 6.9
GTEX-148VJ-2226-SM-5NQ9M 6.4
GTEX-ZQG8-2526-SM-57WEQ 6.2
GTEX-ZQUD-0926-SM-57WE3 4.5
GTEX-13OVI-1926-SM-5IJCG 4.1
GTEX-13111-1426-SM-5DUW3 3.7
GTEX-VUSG-1726-SM-4KKZL 3.6
GTEX-111CU-1326-SM-5NQ8L 2.6
GTEX-ZF2S-1726-SM-57WFT 2.1
GTEX-1192X-2526-SM-59868 1.9
GTEX-117YX-0326-SM-5GICL 1.3
GTEX-UPK5-2026-SM-4JBIM 1.1
GTEX-WEY5-1526-SM-4LMJF 1.1
GTEX-ZC5H-2326-SM-4WAYT 0.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

223.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 223.3
FF:10024-101D6 15,40,85 years, mixed 223.3

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