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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:58.8TPM
GTEx:9.6RPKM
FANTOM5:45.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA050843

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA050843

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

58.8
N/A Female, age 80
Sample 1
TPM: 11.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 2.8
N/A Female, age 57
Sample 3
TPM: 2.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 119.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 158.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 6.0
Samples: 350

Max RPKM: 79.9
Min RPKM: 1.1
Std RPKM: 6.5
Median RPKM: 4.3
GTEX-13NYS-0226-SM-5MR49 79.9
GTEX-13YAN-0426-SM-5O9DR 44.4
GTEX-14E6C-0226-SM-5S2N3 39.7
GTEX-111VG-2326-SM-5N9BK 35.5
GTEX-ZYVF-0226-SM-5GIEG 29.8
GTEX-13FHO-0326-SM-5IJBH 27.2
GTEX-13JVG-0226-SM-5J1MW 26.9
GTEX-11UD2-0126-SM-5EQL2 26.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.3
Samples: 227

Max RPKM: 100.2
Min RPKM: 1.7
Std RPKM: 15.3
Median RPKM: 9.5
GTEX-ZVZP-1126-SM-5GICU 100.2
GTEX-Y9LG-1226-SM-4VBQA 82.6
GTEX-1399S-1426-SM-5PNYQ 72.7
GTEX-Y114-1326-SM-4TT9A 71.0
GTEX-13OVH-1126-SM-5K7YP 68.2
GTEX-ZYVF-1026-SM-5E44V 64.5
GTEX-ZV7C-0826-SM-59HK8 59.9
GTEX-ZTX8-0726-SM-59HL9 57.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

45.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 45.2
FF:10010-101C1 65,65,76 years, mixed 45.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.