Tissue expression of CS - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	154.5	TPM
GTEx:	66.4	RPKM
FANTOM5:	202.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Medium

Antibody staining	Antibody HPA038460	Antibody HPA038461	Antibody CAB075750	Antibody CAB075751	Antibody CAB075752	Antibody CAB075753
Adipocytes	Medium	Medium	Medium	High	Medium
Chondrocytes	Not detected	Medium	Medium	Medium	Not detected	Medium
Fibroblasts	Low	Medium	High	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	Medium

Antibody staining	Antibody HPA038460	Antibody HPA038461	Antibody CAB075750	Antibody CAB075751	Antibody CAB075752	Antibody CAB075753	Antibody CAB075754
Adipocytes	Medium	High	High	High	High	High
Fibroblasts	Low	Medium	High	High	High	High	Medium
Peripheral nerve	Medium	Medium	Medium	Medium	Not detected	High	High

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	154.5

Female, age 80

Sample 1
TPM: 175.3

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 188.6

Female, age 57

Sample 3
TPM: 173.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 118.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 116.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	66.4

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 64.4

Samples: 350

Max RPKM: 181.2
Min RPKM: 28.4
Std RPKM: 21.9
Median RPKM: 58

GTEX-OHPN-0226-SM-48TBV

181.2

GTEX-YB5E-2126-SM-5IFI7

161.6

GTEX-WY7C-2426-SM-3NB2V

146.6

GTEX-ZQG8-1526-SM-5HL65

135.9

GTEX-ZYWO-2526-SM-5GIDM

129.2

GTEX-11EM3-2326-SM-5H12B

125.8

GTEX-R55G-2426-SM-2TC5I

124.5

GTEX-WEY5-1926-SM-3GIL8

121.2

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 69.5

Samples: 227

Max RPKM: 208.3
Min RPKM: 29.5
Std RPKM: 32
Median RPKM: 57.8

GTEX-W5X1-1426-SM-3GIKH

208.3

GTEX-1339X-0726-SM-5L3FF

179.9

GTEX-VUSG-1426-SM-3GIJN

175.9

GTEX-11I78-0226-SM-5HL6R

171.8

GTEX-Y5LM-0826-SM-4VDSW

164.0

GTEX-1122O-0926-SM-5N9C9

160.0

GTEX-12696-1826-SM-5EGJS

147.8

GTEX-11XUK-1726-SM-5GU61

136.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	202.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 202.8

FF:10010-101C1

65,65,76 years, mixed

202.8