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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:96.7TPM
GTEx:45.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Endothelial cells

Medium   Medium   High   High   Medium   Medium   Medium  

Glial cells

Medium   Medium   High   High   Medium   Medium   High  

Neuronal cells

Medium   High   High   High   High   High   High  

Neuropil

Medium   Medium   High   High   Medium   High   Medium  
             
             
             

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

96.7

N/A Male, age 5
Sample 1
TPM: 86.9
overview Female, age 40
Sample 2
TPM: 101.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 101.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

45.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 45.3
Samples: 114

Max RPKM: 62.2
Min RPKM: 27
Std RPKM: 7.3
Median RPKM: 46.5
GTEX-PVOW-2526-SM-2XCF7 62.2
GTEX-11OF3-2926-SM-5HL78 60.5
GTEX-13NYS-3126-SM-5KLYV 60.5
GTEX-UTHO-3026-SM-3GAFB 59.5
GTEX-13FXS-3126-SM-5J2NN 58.2
GTEX-QMR6-1426-SM-32PLA 57.6
GTEX-14BMV-3026-SM-5S2PQ 57.2
GTEX-XLM4-3026-SM-4AT6L 55.7
GTEX-13NYC-2826-SM-5K7WR 54.7
GTEX-14ASI-3026-SM-5S2PN 54.5
GTEX-RNOR-2326-SM-2TF4I 54.5
GTEX-13FHO-3026-SM-5J1O9 54.2
GTEX-WVLH-3026-SM-3MJG9 53.5
GTEX-YFC4-3126-SM-5PNV6 53.1
GTEX-11GSO-2926-SM-5HL73 52.9
GTEX-11DXY-3226-SM-5GIDE 52.6
GTEX-QVJO-1426-SM-2S1QY 52.6
GTEX-TSE9-3026-SM-3DB76 52.1
GTEX-T5JC-2426-SM-3NMDB 51.7
GTEX-1192X-3126-SM-5N9BY 51.2
GTEX-11NUK-2926-SM-5A5MD 51.2
GTEX-X585-3026-SM-46MWF 51.1
GTEX-132Q8-3026-SM-5PNVG 51.0
GTEX-145LS-3126-SM-5Q5BY 51.0
GTEX-ZAK1-3026-SM-5S2MJ 50.9
GTEX-11DXW-1126-SM-5H12Q 50.7
GTEX-WWYW-3126-SM-3NB39 50.5
GTEX-13OW6-3026-SM-5J2MI 50.4
GTEX-X4XX-3026-SM-3NMB2 50.4
GTEX-WHSE-3026-SM-3P5ZH 50.2
GTEX-13OW8-2826-SM-5L3GC 50.1
GTEX-OXRN-2426-SM-2I5EQ 49.8
GTEX-T6MN-2626-SM-32PMQ 49.8
GTEX-12WSC-3026-SM-5GCNF 49.4
GTEX-13VXU-2926-SM-5LU5C 49.1
GTEX-144GL-3026-SM-5Q5CW 49.0
GTEX-ZYFD-3026-SM-5E44C 48.8
GTEX-13OVH-3026-SM-5MR4N 48.6
GTEX-145MG-3026-SM-5RQJA 48.3
GTEX-WZTO-2926-SM-3NM9I 48.3
GTEX-11PRG-2926-SM-5987A 48.2
GTEX-12ZZY-3026-SM-5GCOU 48.1
GTEX-1128S-2726-SM-5H12C 48.0
GTEX-117XS-3026-SM-5N9CA 47.9
GTEX-145MH-3026-SM-5Q5DZ 47.9
GTEX-11O72-2926-SM-5BC4V 47.8
GTEX-13O3Q-2926-SM-5KM45 47.5
GTEX-WL46-2926-SM-3LK82 47.5
GTEX-131YS-3126-SM-5KLYT 47.4
GTEX-11WQK-3026-SM-5EQL6 47.3
GTEX-ZVT3-3026-SM-5E43N 47.3
GTEX-12126-1026-SM-5P9JJ 47.1
GTEX-1313W-3126-SM-5LZUI 47.1
GTEX-13O3O-3126-SM-5KM3H 47.1
GTEX-12ZZX-2926-SM-5GCOQ 47.0
GTEX-145MF-2726-SM-5O995 46.6
GTEX-13SLX-3126-SM-5S2Q5 46.5
GTEX-QVUS-2826-SM-3GADB 46.5
GTEX-1399T-3026-SM-5KLZC 45.9
GTEX-111FC-3126-SM-5GZZ2 45.8
GTEX-XOTO-3026-SM-4B65M 45.8
GTEX-R55F-1326-SM-5S2V4 45.4
GTEX-T2IS-3026-SM-32QPM 45.3
GTEX-13FLW-1426-SM-5K7YE 44.9
GTEX-ZUA1-3026-SM-59HJC 44.9
GTEX-11OC5-0726-SM-5P9JK 44.6
GTEX-11ZUS-2926-SM-5FQSL 44.4
GTEX-11ONC-2926-SM-5P9JM 43.9
GTEX-QDT8-2926-SM-32PKC 43.9
GTEX-Y8DK-0826-SM-4TT3T 43.8
GTEX-YJ89-3026-SM-5IFJI 43.4
GTEX-12WSH-3026-SM-5CVNI 43.3
GTEX-12ZZZ-3026-SM-5BC67 43.3
GTEX-12ZZW-2926-SM-5LZUP 43.1
GTEX-Z93S-2926-SM-57WB9 42.9
GTEX-14A5I-2926-SM-5Q5CQ 42.5
GTEX-13FHP-3026-SM-5IJBS 42.4
GTEX-NPJ8-1526-SM-2D7VU 42.4
GTEX-ZZPT-3026-SM-5GZXH 42.3
GTEX-Q2AG-2926-SM-2HMJ3 42.1
GTEX-13OVJ-2826-SM-5L3GW 42.0
GTEX-RU72-3026-SM-5SI7Y 42.0
GTEX-13S7M-3126-SM-5RQJQ 41.8
GTEX-13X6K-2926-SM-5Q5D5 41.2
GTEX-131XW-3126-SM-5LZUC 40.2
GTEX-11GS4-3126-SM-5A5LH 40.1
GTEX-11EMC-3226-SM-5EGKW 40.0
GTEX-ZE7O-3126-SM-5HL5X 39.5
GTEX-12WSD-3126-SM-5HL7P 38.8
GTEX-13PL6-3126-SM-5LUAR 38.8
GTEX-13X6J-3026-SM-5Q5CU 38.8
GTEX-11EI6-3026-SM-5GZZO 38.7
GTEX-139T8-1026-SM-5J2MC 38.6
GTEX-13NYB-3026-SM-5IJD7 38.6
GTEX-NPJ7-2726-SM-2I3FT 38.6
GTEX-144FL-3026-SM-5O99C 38.2
GTEX-Y111-2726-SM-4TT3N 38.2
GTEX-13QIC-2926-SM-5J2NF 37.0
GTEX-11TTK-2926-SM-5PNYP 36.7
GTEX-13OW7-3026-SM-5L3GY 36.6
GTEX-ZAJG-3126-SM-5HL9J 36.4
GTEX-1117F-3226-SM-5N9CT 36.3
GTEX-13JVG-3126-SM-5L3FH 36.2
GTEX-13G51-3026-SM-5IJB8 36.1
GTEX-13IVO-2926-SM-5L3CZ 34.7
GTEX-PWO3-0926-SM-2I5EY 34.0
GTEX-13PVQ-3026-SM-5SI93 32.8
GTEX-1445S-3026-SM-5O9BR 32.6
GTEX-13JUV-2926-SM-5LZX7 31.7
GTEX-N7MT-1126-SM-5SI7V 30.8
GTEX-11GSP-3226-SM-5986O 29.3
GTEX-147GR-3026-SM-5S2ML 28.7
GTEX-12WSA-2926-SM-5EQ4D 28.1
GTEX-11NV4-2126-SM-5N9DS 27.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 45.7
Samples: 108

Max RPKM: 64.6
Min RPKM: 21.2
Std RPKM: 10.4
Median RPKM: 47.8
GTEX-X585-0011-R10A-SM-46MUY 64.6
GTEX-NL3H-0011-R10A-SM-2I3E9 62.9
GTEX-QVUS-0011-R10A-SM-3GIK3 62.4
GTEX-XLM4-0011-R10A-SM-4AT5P 61.4
GTEX-13FHO-0011-R10b-SM-5J2MM 59.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 59.0
GTEX-WL46-0011-R10A-SM-3MJFQ 59.0
GTEX-T6MN-0011-R10A-SM-32QP7 58.4
GTEX-145MG-0011-R10a-SM-5PNWG 57.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 57.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 57.5
GTEX-WVLH-0011-R10A-SM-3MJFM 57.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 56.9
GTEX-11H98-0011-R10b-SM-5NQ98 56.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 56.3
GTEX-13NYS-0011-R10a-SM-5MR4S 55.9
GTEX-S7SE-0011-R10A-SM-2XCDF 55.9
GTEX-12WSF-0011-R10a-SM-5LZVH 55.3
GTEX-13X6K-0011-R10a-SM-5P9JR 55.2
GTEX-YFC4-0011-R10a-SM-4SOK5 55.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 55.0
GTEX-WZTO-0011-R10B-SM-4E3KB 54.7
GTEX-145MH-0011-R10b-SM-5PNUK 54.5
GTEX-T5JC-0011-R10A-SM-32PM2 54.5
GTEX-13CZV-0011-R10b-SM-5LZYD 54.2
GTEX-QDT8-0011-R10A-SM-32PKG 54.2
GTEX-12WSC-0011-R10a-SM-5GU57 54.0
GTEX-WWYW-0011-R10A-SM-3NB35 54.0
GTEX-12WSE-0011-R10b-SM-5P9JV 53.9
GTEX-QMR6-0011-R10A-SM-32PKO 53.7
GTEX-13O3Q-0011-R10b-SM-5KM39 53.4
GTEX-14BIL-0011-R10a-SM-5SI75 53.3
GTEX-X4XX-0011-R10B-SM-46MWO 52.9
GTEX-X4EP-0011-R10B-SM-4QASJ 52.8
GTEX-131YS-0011-R10b-SM-5EQ5N 52.1
GTEX-1313W-0011-R10b-SM-5DUXA 52.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 52.0
GTEX-145LS-0011-R10a-SM-5PNUQ 51.8
GTEX-131XH-0011-R10a-SM-5EGLJ 51.6
GTEX-13N1W-0011-R10b-SM-5MR4H 50.8
GTEX-13FXS-0011-R10a-SM-5J2MA 50.4
GTEX-13OW8-0011-R10a-SM-5L3H6 50.2
GTEX-13S7M-0011-R10b-SM-5PNZB 50.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 50.1
GTEX-P44H-0011-R10A-SM-2XCEK 50.1
GTEX-N7MS-0011-R10A-SM-2HMJK 49.9
GTEX-ZF28-0011-R10a-SM-4WWEH 49.6
GTEX-14BIN-0011-R10a-SM-5S2UA 49.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 48.9
GTEX-13SLX-0011-R10a-SM-5P9HV 48.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 48.4
GTEX-13OW7-0011-R10a-SM-5L3H3 48.2
GTEX-N7MT-0011-R10A-SM-2I3E1 48.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 47.9
GTEX-13QIC-0011-R10a-SM-5O9C7 47.7
GTEX-13X6J-0011-R10b-SM-5PNWA 46.8
GTEX-12WSM-0011-R10a-SM-5DUWV 46.5
GTEX-OXRN-0011-R10A-SM-2I5GC 46.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 46.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 46.1
GTEX-147GR-0011-R10b-SM-5S2UM 46.0
GTEX-13N2G-0011-R10a-SM-5MR34 45.9
GTEX-12WSH-0011-R10a-SM-5LZUS 45.5
GTEX-13NYB-0011-R10a-SM-5KM43 45.5
GTEX-13OVL-0011-R10a-SM-5L3GS 45.3
GTEX-147F4-0011-R10b-SM-5S2WC 45.1
GTEX-13FLW-0011-R10b-SM-5LZZF 45.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 45.0
GTEX-YJ89-0011-R10a-SM-4SOK9 44.1
GTEX-13O3O-0011-R10a-SM-5LUA9 43.3
GTEX-13X6I-0011-R10a-SM-5PNWI 43.2
GTEX-13JUV-0011-R10b-SM-5LZXR 43.1
GTEX-TSE9-0011-R10A-SM-3DB7O 43.0
GTEX-13OW6-0011-R10a-SM-5L3HE 42.9
GTEX-13QJC-0011-R10a-SM-5SI63 41.9
GTEX-145LU-0011-R10a-SM-5PNWJ 40.4
GTEX-RVPU-0011-R10A-SM-2XCAH 40.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 39.7
GTEX-13SLW-0011-R10a-SM-5S2UI 39.6
GTEX-12126-0011-R10b-SM-5BC6T 39.5
GTEX-13G51-0011-R10b-SM-5LZYF 39.5
GTEX-ZUA1-0011-R10a-SM-51MT6 39.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 39.0
GTEX-ZVT3-0011-R10b-SM-57WB6 37.5
GTEX-Z93S-0011-R10a-SM-4RGNM 37.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 36.8
GTEX-11WQK-0011-R10a-SM-5BC6R 36.3
GTEX-NL4W-0011-R10A-SM-2I3DY 36.0
GTEX-11WQC-0011-R10a-SM-57WCT 35.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 33.0
GTEX-1445S-0011-R10a-SM-5PNWB 32.7
GTEX-X261-0011-R10B-SM-4E3JT 32.6
GTEX-OXRO-0011-R10A-SM-2I5EH 32.0
GTEX-11ZUS-0011-R10b-SM-5BC79 31.5
GTEX-XMD1-0011-R10A-SM-4AT4A 31.5
GTEX-1477Z-0011-R10b-SM-5S2RF 30.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 29.4
GTEX-12WSD-0011-R10b-SM-5GU79 29.0
GTEX-131XW-0011-R10a-SM-5DUVA 28.4
GTEX-14753-0011-R10b-SM-5S2WE 28.2
GTEX-13NZA-0011-R10b-SM-5KM54 26.2
GTEX-ZXG5-0011-R10a-SM-57WDD 25.9
GTEX-139TS-0011-R10a-SM-5K7TU 25.8
GTEX-12WSA-0011-R10b-SM-5P9ET 24.6
GTEX-ZV68-0011-R10a-SM-51MT7 23.3
GTEX-13JVG-0011-R10b-SM-5KM2P 23.2
GTEX-13IVO-0011-R10a-SM-5LZY3 23.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 21.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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