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Field

Term
Gene name

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Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:86.9TPM
GTEx:46.2RPKM
FANTOM5:127.1Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Low
Glandular cells:High
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Cells in endometrial stroma

Not detected   Low   High   High   Medium   High   High  

Glandular cells

High   High   High   High   High   High   High  
             
             
             

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Low
Glandular cells:High
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Cells in endometrial stroma

Not detected   Low   High   High   Low   Medium   Medium  

Glandular cells

High   High   High   High   High   High   High  
             
             
             

ENDOMETRIUM - HPA RNA-seq

Average TPM

86.9

overview Female, age 34
Sample 1
TPM: 76.2
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 66.8
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 103.2
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 88.7
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 99.9
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

46.2

GTEx sample id

RPKM

 

Uterus - Endometrium

Uterus - Endometrium
RPKM: 46.2
Samples: 14

Max RPKM: 59
Min RPKM: 37.9
Std RPKM: 5.5
Median RPKM: 45.4
GTEX-S32W-1426-SM-4AD66 59.0
GTEX-R55G-1626-SM-48FF4 51.5
GTEX-ZVT2-0426-SM-5E44S 50.9
GTEX-ZTPG-2026-SM-5O999 50.4
GTEX-PX3G-2026-SM-48U1H 49.8
GTEX-T5JW-1526-SM-4DM5E 47.9
GTEX-T6MO-1526-SM-4DM57 46.9
GTEX-PWN1-2026-SM-48TD9 43.9
GTEX-U3ZN-0726-SM-4DXT5 43.7
GTEX-XUZC-0926-SM-4BOQF 42.1
GTEX-P78B-2526-SM-3P5ZY 41.9
GTEX-13QBU-1626-SM-5LU4S 41.8
GTEX-Y114-1826-SM-4TT87 39.6
GTEX-11EM3-1926-SM-5987U 37.9
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

127.1

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 127.1
FF:10100-102D1 23-63 years, female 127.1

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