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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.1TPM
GTEx:22.7RPKM
FANTOM5:67.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Bile duct cells

Not detected   Medium   Medium   Not detected   Medium  

Hepatocytes

Low   High   Not detected   Medium   Not detected   Not detected   Medium  
             
             
             

LIVER - HPA RNA-seq

Average TPM

17.1

N/A Female, age 60
Sample 1
TPM: 15.6
overview Male, age 54
Sample 2
TPM: 17.1
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 14.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 15.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 12.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 21.3
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 18.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 12.1
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 17.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 25.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

22.7

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 22.7
Samples: 119

Max RPKM: 48.4
Min RPKM: 13.3
Std RPKM: 6.1
Median RPKM: 21.5
GTEX-13N11-0926-SM-5IJG2 48.4
GTEX-T6MN-1226-SM-3NMA5 41.5
GTEX-11NV4-1326-SM-5HL6V 38.9
GTEX-WZTO-0626-SM-4PQYY 38.8
GTEX-13SLX-1226-SM-5S2Q6 38.6
GTEX-S32W-1926-SM-4AD63 37.0
GTEX-11WQC-0726-SM-5EQMR 35.2
GTEX-R53T-0326-SM-48FEC 33.0
GTEX-ZYT6-0626-SM-5E45V 32.6
GTEX-13FTZ-0726-SM-5IFFY 32.1
GTEX-14C38-1526-SM-5RQJ7 31.5
GTEX-13112-1426-SM-5EGH8 30.6
GTEX-12696-0826-SM-5EGGE 30.0
GTEX-11GSP-0626-SM-5986T 29.8
GTEX-1269C-0626-SM-5FQSS 29.5
GTEX-Y5LM-0426-SM-4VBRO 28.8
GTEX-1497J-0726-SM-5Q5D1 28.0
GTEX-12WSG-0626-SM-5FQTQ 27.8
GTEX-14A5I-1726-SM-5QGQ5 27.6
GTEX-147JS-1126-SM-5RQIW 27.4
GTEX-12WSI-0226-SM-5GCNA 27.3
GTEX-13OW6-2626-SM-5IFF2 27.0
GTEX-13NYB-1026-SM-5IFH3 26.9
GTEX-YEC4-0826-SM-5P9FV 26.8
GTEX-12WSM-0726-SM-5GCOW 26.4
GTEX-RNOR-1426-SM-48FDJ 26.3
GTEX-UTHO-2426-SM-4JBHD 26.0
GTEX-X4EO-1126-SM-4QARQ 25.9
GTEX-XBEC-1526-SM-4AT68 25.8
GTEX-11ZUS-2526-SM-59872 25.7
GTEX-QEG4-1826-SM-4R1JN 25.4
GTEX-RN64-1826-SM-48FDV 25.3
GTEX-ZVT3-1626-SM-5GU66 24.9
GTEX-131YS-1626-SM-5HL6C 24.7
GTEX-147F4-1426-SM-5LUA8 24.6
GTEX-WQUQ-1926-SM-4OOSA 24.2
GTEX-YB5E-0326-SM-5IFHU 24.2
GTEX-11EQ9-0526-SM-5A5JZ 24.1
GTEX-11OF3-0726-SM-5BC4Z 24.1
GTEX-S4Z8-0526-SM-4AD4T 24.1
GTEX-139TU-0826-SM-5IJFG 24.0
GTEX-QDVN-0826-SM-48TZ2 23.9
GTEX-XOTO-0826-SM-4B65O 23.7
GTEX-QEL4-1226-SM-447A4 23.6
GTEX-13NZ9-1326-SM-5MR3V 23.4
GTEX-13NZB-0626-SM-5IFH6 23.4
GTEX-X261-1726-SM-4PQYT 23.3
GTEX-12WSL-0226-SM-5CVMJ 23.2
GTEX-131XE-0326-SM-5LZVO 23.1
GTEX-13FTW-1126-SM-5J2NV 22.8
GTEX-11ZVC-0726-SM-5FQT9 22.7
GTEX-13VXU-0926-SM-5IFFH 22.4
GTEX-146FH-1526-SM-5NQBU 22.1
GTEX-ZVT4-0626-SM-5E45T 22.0
GTEX-145LU-1326-SM-5LU9N 21.9
GTEX-QESD-2026-SM-447BI 21.8
GTEX-YFC4-1526-SM-5IFJS 21.6
GTEX-ZPU1-0826-SM-57WG2 21.6
GTEX-13113-1326-SM-5GCOI 21.5
GTEX-ZF2S-3026-SM-4WWCH 21.5
GTEX-14AS3-0126-SM-5Q5F4 21.4
GTEX-11DXY-0526-SM-5EGGQ 21.3
GTEX-RTLS-1326-SM-46MUN 21.2
GTEX-S33H-1626-SM-4AD68 21.1
GTEX-ZYY3-0626-SM-5NQ6W 21.1
GTEX-UPIC-0926-SM-4IHLV 20.5
GTEX-13QJC-0726-SM-5RQJK 20.4
GTEX-PX3G-0826-SM-48TZS 20.3
GTEX-ZF29-2026-SM-4WWB7 20.3
GTEX-ZTPG-1426-SM-51MT3 20.2
GTEX-11NUK-1226-SM-5P9GM 20.1
GTEX-ZZPU-0426-SM-5GZYH 20.0
GTEX-139TS-1426-SM-5IFJD 19.9
GTEX-ZAB4-0826-SM-5LU9D 19.9
GTEX-YECK-1926-SM-4W21H 19.6
GTEX-1212Z-0226-SM-59HLF 19.5
GTEX-13O3O-1826-SM-5IFGW 19.5
GTEX-13PVR-0126-SM-5S2PY 19.5
GTEX-13N2G-0926-SM-5IFGJ 19.4
GTEX-P78B-1326-SM-3P611 19.4
GTEX-U3ZN-0226-SM-3DB8D 19.4
GTEX-OOBJ-0826-SM-3NB2K 19.3
GTEX-WYVS-1926-SM-4PQZ2 19.1
GTEX-12KS4-1326-SM-5LUB3 19.0
GTEX-Q2AG-1126-SM-48U1P 19.0
GTEX-145MF-0826-SM-5QGQA 18.8
GTEX-RM2N-1926-SM-48FCU 18.8
GTEX-Q734-0326-SM-48U15 18.6
GTEX-ZVP2-0626-SM-51MSO 18.6
GTEX-Y5V5-0926-SM-4VBPZ 18.5
GTEX-12ZZZ-1326-SM-59HKW 18.4
GTEX-TKQ2-1726-SM-4DXUP 18.3
GTEX-X4EP-1026-SM-4QAS5 18.1
GTEX-139YR-0226-SM-5IFEM 18.0
GTEX-145MO-2326-SM-5NQ9K 18.0
GTEX-RWSA-1426-SM-47JXA 17.9
GTEX-1399R-1226-SM-5P9GF 17.8
GTEX-11ZTS-1426-SM-5EQMM 17.6
GTEX-Z9EW-0426-SM-5CVM9 17.4
GTEX-VUSG-0126-SM-4KL1X 17.3
GTEX-X3Y1-2726-SM-4PQZH 17.3
GTEX-X4XY-1626-SM-46MVN 17.3
GTEX-1399T-0826-SM-5IFES 17.1
GTEX-RU72-1426-SM-46MUF 17.0
GTEX-12WSD-1426-SM-5GCN9 16.8
GTEX-13FLV-0326-SM-5N9DJ 16.8
GTEX-SJXC-1226-SM-4DM78 16.6
GTEX-144GM-1326-SM-5LU5E 16.0
GTEX-131XH-0626-SM-5LZWH 15.8
GTEX-UPK5-1426-SM-4JBHH 15.7
GTEX-132NY-0926-SM-5P9G3 15.2
GTEX-14753-1626-SM-5NQ9L 15.0
GTEX-11DXZ-0126-SM-5EGGY 14.7
GTEX-14E1K-0326-SM-5S2PE 14.6
GTEX-ZAB5-0426-SM-5CVMI 14.6
GTEX-REY6-1226-SM-48FDR 14.3
GTEX-14DAQ-1726-SM-5S2R2 14.1
GTEX-QV44-0326-SM-4R1KD 13.4
GTEX-WFON-1726-SM-4LVMQ 13.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

67.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 67.2
FF:10018-101C9 64,69,70 years, mixed 67.2

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