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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:85.5TPM
GTEx:54.6RPKM
FANTOM5:230.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Glandular cells

High   High   High   High   High   High   High  
             
             
             

SMALL INTESTINE - HPA RNA-seq

Average TPM

85.5

overview Male, age 65
Sample 1
TPM: 80.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 82.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 84.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 94.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

54.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 54.6
Samples: 88

Max RPKM: 82.6
Min RPKM: 37.7
Std RPKM: 8.5
Median RPKM: 52.9
GTEX-WFG8-1626-SM-4LVMB 82.6
GTEX-YB5E-1526-SM-5IFIE 77.0
GTEX-XGQ4-1326-SM-4GIDU 76.0
GTEX-133LE-1426-SM-5IFH1 70.3
GTEX-ZXES-1526-SM-5NQ95 70.2
GTEX-ZZ64-0526-SM-5GZXM 69.9
GTEX-XUZC-1426-SM-4BRV3 69.7
GTEX-139YR-2226-SM-5IFFW 69.5
GTEX-145LT-1026-SM-5LU9O 68.8
GTEX-131XF-1326-SM-5GCMQ 67.5
GTEX-ZLV1-1126-SM-4WWBW 65.1
GTEX-ZYFG-2026-SM-5E43Y 64.9
GTEX-131XG-1726-SM-5LZUR 64.2
GTEX-11I78-1126-SM-5A5K5 64.0
GTEX-11EQ9-1326-SM-5985X 63.8
GTEX-Y5LM-1626-SM-4VDTB 62.2
GTEX-ZP4G-1626-SM-57WGD 62.0
GTEX-14DAR-1426-SM-5RQIR 61.7
GTEX-UPK5-2026-SM-4JBIM 60.3
GTEX-ZPCL-1726-SM-57WEO 59.6
GTEX-148VJ-2226-SM-5NQ9M 59.2
GTEX-1122O-1326-SM-5H11F 58.2
GTEX-13RTK-0826-SM-5Q5C6 58.1
GTEX-ZVT2-2126-SM-5NQ93 57.4
GTEX-11P82-0826-SM-5P9GU 56.9
GTEX-13O61-1326-SM-5KM31 56.7
GTEX-1399U-2126-SM-5IFEZ 56.5
GTEX-13FTW-2026-SM-5IJE2 56.5
GTEX-13113-1226-SM-5EGHT 56.4
GTEX-YEC4-1726-SM-4W21E 56.1
GTEX-11DXZ-1326-SM-5H11X 55.8
GTEX-ZYWO-1526-SM-5SIAL 55.6
GTEX-ZTSS-0926-SM-59865 55.6
GTEX-11DXX-1626-SM-5H11H 55.4
GTEX-139T6-1026-SM-5IJGC 55.3
GTEX-ZLFU-1526-SM-4WWBT 55.0
GTEX-ZVP2-1726-SM-5GU5P 54.4
GTEX-ZEX8-1826-SM-57WBH 54.4
GTEX-WFG7-1726-SM-4LVME 54.3
GTEX-12WSK-1526-SM-5CVNO 54.2
GTEX-1399R-2026-SM-5K7WN 54.0
GTEX-13D11-0726-SM-5LZZB 53.5
GTEX-ZVZP-1826-SM-5GZXB 53.4
GTEX-VUSG-1726-SM-4KKZL 53.1
GTEX-XBED-1426-SM-4AT4G 52.8
GTEX-WH7G-1626-SM-4LVMY 52.7
GTEX-ZA64-1226-SM-5HL7B 52.6
GTEX-Y114-1426-SM-4TT6W 52.3
GTEX-11NSD-1726-SM-5N9C3 52.3
GTEX-VJYA-0926-SM-4KL1N 51.8
GTEX-13QBU-1926-SM-5IJEW 51.7
GTEX-12BJ1-1926-SM-5HL9Z 51.7
GTEX-ZTX8-0526-SM-59HLD 51.6
GTEX-WRHK-1026-SM-4MVOD 51.4
GTEX-11XUK-1426-SM-5EQMG 51.4
GTEX-WFJO-0926-SM-4LVM2 51.1
GTEX-1399S-2026-SM-5KM4B 51.1
GTEX-117YX-0326-SM-5GICL 50.7
GTEX-XAJ8-0526-SM-47JYK 50.1
GTEX-111CU-1326-SM-5NQ8L 49.9
GTEX-14E6E-1626-SM-5RQI7 49.9
GTEX-Z9EW-0926-SM-5CVMM 49.8
GTEX-ZQUD-0926-SM-57WE3 49.8
GTEX-ZTPG-2626-SM-57WFX 49.3
GTEX-13111-1426-SM-5DUW3 49.0
GTEX-13PL7-2626-SM-5IFH4 48.8
GTEX-145ME-0926-SM-5O9AR 48.5
GTEX-11P7K-1626-SM-5GU63 48.2
GTEX-11VI4-1626-SM-5EQKO 48.0
GTEX-X15G-1426-SM-4PQZK 47.8
GTEX-13OVI-1926-SM-5IJCG 47.0
GTEX-ZQG8-2526-SM-57WEQ 47.0
GTEX-XXEK-1026-SM-4BRUW 46.8
GTEX-Y9LG-1626-SM-5IFHM 46.4
GTEX-ZPIC-2326-SM-57WDW 46.3
GTEX-WQUQ-2426-SM-4MVNW 46.1
GTEX-X5EB-1626-SM-4E3IV 45.7
GTEX-WEY5-1526-SM-4LMJF 45.3
GTEX-1192X-2526-SM-59868 45.1
GTEX-13FH7-1226-SM-5IJFK 45.0
GTEX-YF7O-1826-SM-5IFIU 44.9
GTEX-ZC5H-2326-SM-4WAYT 44.5
GTEX-ZF2S-1726-SM-57WFT 44.2
GTEX-13CF3-1226-SM-5LZXN 44.2
GTEX-Y3IK-1726-SM-4YCCR 44.1
GTEX-XMK1-1826-SM-4B66F 43.3
GTEX-13O21-1026-SM-5IJDU 41.6
GTEX-111YS-1426-SM-5GID8 37.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

230.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 230.8
FF:10024-101D6 15,40,85 years, mixed 230.8

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The Human Protein Atlas project is funded
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