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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA URINARY BLADDER

GENE/PROTEIN

Antibody validation


Dictionary

Urinary bladder

URINARY BLADDER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:67.2TPM
GTEx:53.0RPKM
FANTOM5:119.9Tags Per Million

URINARY BLADDER - Annotated protein expression

Annotated protein
expression

Urothelial cells:High
 

Antibody staining

Antibody HPA038460

 

Antibody HPA038461

 

Antibody CAB075750

 

Antibody CAB075751

 

Antibody CAB075752

 

Antibody CAB075753

 

Antibody CAB075754

 

Urothelial cells

Medium   High   High   High   Medium   High   High  
             
             
             

URINARY BLADDER - HPA RNA-seq

Average TPM

67.2

overview Male, age 74
Sample 1
TPM: 65.4
Cell types%
Urothelial cells: 5
Smooth muscle cells: 60
Fibroblasts: 20
Endothelial cells: 10
Other cell types: 5
overview Male, age 80
Sample 2
TPM: 68.9
Cell types%
Urothelial cells: 10
Smooth muscle cells: 45
Fibroblasts: 15
Endothelial cells: 10
Other cell types: 20

URINARY BLADDER - GTEx RNA-seq

Average RPKM

53.0

GTEx sample id

RPKM

 

Bladder

Bladder
RPKM: 53.0
Samples: 11

Max RPKM: 60.8
Min RPKM: 45.6
Std RPKM: 4.8
Median RPKM: 54.3
GTEX-TMMY-1526-SM-4DXST 60.8
GTEX-S4Q7-0926-SM-4AD5D 57.7
GTEX-SE5C-1026-SM-4BRUG 56.3
GTEX-S32W-1126-SM-4AD5V 56.1
GTEX-U3ZM-0826-SM-4DXU6 55.7
GTEX-U4B1-1226-SM-4DXT7 54.3
GTEX-S3XE-1226-SM-4AD4L 54.0
GTEX-SNOS-0526-SM-4DM54 49.8
GTEX-U3ZN-1226-SM-4DXUD 47.5
GTEX-S4UY-0926-SM-4AD6O 45.6
GTEX-SNMC-0826-SM-4DM66 45.6
Show all

URINARY BLADDER - FANTOM5 CAGE

Average Tags Per Million

119.9

FANTOM5 sample id

Sample description

Tags Per Million

Bladder
Tags Per Million: 119.9
FF:10011-101C2 55,58,79 years, mixed 119.9

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