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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:124.4TPM
GTEx:50.1RPKM
FANTOM5:487.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA004102

 

Antibody CAB010309

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

124.4

overview Male, age 65
Sample 1
TPM: 96.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 121.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 110.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 169.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

50.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 50.1
Samples: 88

Max RPKM: 176.3
Min RPKM: 19.6
Std RPKM: 20.1
Median RPKM: 44.9
GTEX-ZTSS-0926-SM-59865 176.3
GTEX-13FTW-2026-SM-5IJE2 90.9
GTEX-13D11-0726-SM-5LZZB 90.5
GTEX-XXEK-1026-SM-4BRUW 87.7
GTEX-ZTX8-0526-SM-59HLD 83.9
GTEX-1122O-1326-SM-5H11F 79.8
GTEX-ZVZP-1826-SM-5GZXB 77.3
GTEX-13PL7-2626-SM-5IFH4 75.7
GTEX-111YS-1426-SM-5GID8 69.4
GTEX-WQUQ-2426-SM-4MVNW 68.2
GTEX-1192X-2526-SM-59868 67.5
GTEX-XBED-1426-SM-4AT4G 67.4
GTEX-13CF3-1226-SM-5LZXN 64.2
GTEX-ZTPG-2626-SM-57WFX 64.0
GTEX-111CU-1326-SM-5NQ8L 63.9
GTEX-148VJ-2226-SM-5NQ9M 61.6
GTEX-WFG8-1626-SM-4LVMB 61.5
GTEX-YEC4-1726-SM-4W21E 60.6
GTEX-ZPIC-2326-SM-57WDW 59.6
GTEX-Y9LG-1626-SM-5IFHM 59.3
GTEX-YF7O-1826-SM-5IFIU 58.8
GTEX-ZYWO-1526-SM-5SIAL 58.5
GTEX-ZLV1-1126-SM-4WWBW 58.3
GTEX-ZVT2-2126-SM-5NQ93 57.4
GTEX-145LT-1026-SM-5LU9O 56.9
GTEX-ZPCL-1726-SM-57WEO 56.3
GTEX-Y5LM-1626-SM-4VDTB 56.1
GTEX-ZYFG-2026-SM-5E43Y 55.8
GTEX-117YX-0326-SM-5GICL 55.1
GTEX-ZVP2-1726-SM-5GU5P 54.7
GTEX-14DAR-1426-SM-5RQIR 53.1
GTEX-139T6-1026-SM-5IJGC 52.7
GTEX-YB5E-1526-SM-5IFIE 51.8
GTEX-139YR-2226-SM-5IFFW 51.0
GTEX-11DXX-1626-SM-5H11H 50.8
GTEX-13111-1426-SM-5DUW3 50.7
GTEX-XAJ8-0526-SM-47JYK 48.2
GTEX-XGQ4-1326-SM-4GIDU 47.4
GTEX-ZZ64-0526-SM-5GZXM 46.7
GTEX-ZA64-1226-SM-5HL7B 45.9
GTEX-11EQ9-1326-SM-5985X 45.6
GTEX-XMK1-1826-SM-4B66F 45.5
GTEX-XUZC-1426-SM-4BRV3 45.4
GTEX-UPK5-2026-SM-4JBIM 44.9
GTEX-133LE-1426-SM-5IFH1 44.9
GTEX-13QBU-1926-SM-5IJEW 44.7
GTEX-ZC5H-2326-SM-4WAYT 44.6
GTEX-11P82-0826-SM-5P9GU 44.0
GTEX-WFG7-1726-SM-4LVME 42.1
GTEX-14E6E-1626-SM-5RQI7 41.9
GTEX-11I78-1126-SM-5A5K5 41.8
GTEX-13O21-1026-SM-5IJDU 41.8
GTEX-131XG-1726-SM-5LZUR 41.5
GTEX-13O61-1326-SM-5KM31 41.4
GTEX-ZEX8-1826-SM-57WBH 41.3
GTEX-1399U-2126-SM-5IFEZ 41.2
GTEX-1399S-2026-SM-5KM4B 40.8
GTEX-Y114-1426-SM-4TT6W 40.3
GTEX-ZQUD-0926-SM-57WE3 40.2
GTEX-13RTK-0826-SM-5Q5C6 39.8
GTEX-WH7G-1626-SM-4LVMY 39.6
GTEX-VUSG-1726-SM-4KKZL 39.6
GTEX-12WSK-1526-SM-5CVNO 39.4
GTEX-WFJO-0926-SM-4LVM2 39.3
GTEX-145ME-0926-SM-5O9AR 38.9
GTEX-11P7K-1626-SM-5GU63 38.6
GTEX-13113-1226-SM-5EGHT 38.6
GTEX-X5EB-1626-SM-4E3IV 38.0
GTEX-13OVI-1926-SM-5IJCG 36.7
GTEX-13FH7-1226-SM-5IJFK 36.6
GTEX-ZF2S-1726-SM-57WFT 35.7
GTEX-ZXES-1526-SM-5NQ95 35.5
GTEX-Z9EW-0926-SM-5CVMM 35.3
GTEX-VJYA-0926-SM-4KL1N 35.2
GTEX-131XF-1326-SM-5GCMQ 34.7
GTEX-ZLFU-1526-SM-4WWBT 34.5
GTEX-11DXZ-1326-SM-5H11X 34.3
GTEX-ZQG8-2526-SM-57WEQ 33.7
GTEX-ZP4G-1626-SM-57WGD 33.5
GTEX-11NSD-1726-SM-5N9C3 32.8
GTEX-Y3IK-1726-SM-4YCCR 32.8
GTEX-X15G-1426-SM-4PQZK 32.2
GTEX-WEY5-1526-SM-4LMJF 32.1
GTEX-1399R-2026-SM-5K7WN 31.1
GTEX-12BJ1-1926-SM-5HL9Z 30.1
GTEX-11XUK-1426-SM-5EQMG 26.8
GTEX-WRHK-1026-SM-4MVOD 24.0
GTEX-11VI4-1626-SM-5EQKO 19.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

487.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 487.8
FF:10024-101D6 15,40,85 years, mixed 487.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.