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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA023844   HPA050665   sc-8405  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

     

Released in version

5   12   2  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 
Immunocytochemistry

  Supported    
Immunohistochemistry

Approved     Approved  
Western blot

Supported   Uncertain   Supported  
Protein array

Supported   Approved    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Standard validation

  Supported    

     

Figure description

  Immunofluorescent staining of human cell line A-431 shows localization to nucleoplasm & cytosol.    

Antibody dilution

  1:200    

Literature conformity

  The subcellular location is supported by literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Standard validation

Approved     Approved  

     

Figure description

Immunohistochemical staining of human cerebellum shows strong cytoplasmic and nuclear positivity in Purkinje cells.     Immunohistochemical staining of human testis shows strong cytoplasmic and nuclear positivity in cells in seminiferus ducts.  

Expression

RNA: detected in 37 tissues
Protein: detected in 63 cell types
    RNA: detected in 37 tissues
Protein: detected in 78 cell types
 

Retrieval

HIER pH6     HIER pH6  

Antibody dilution

1:35     1:200  

Literature conformity

Consistent with extensive gene/protein characterization data.     Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.     Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Single band differing more than +/-20% from predicted size in kDa and not supported by experimental and/or bioinformatic data.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
 

     

Figure description

Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 110, 82, 49.3, 32.2, 25.5, 17.6
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

115.6, 115.2, 115, 114.2, 113.9, 112.8   115.6, 115.2, 115, 114.2, 113.9, 112.8   115.6, 115.2, 115, 114.2, 113.9, 112.8, 18.5  

Antibody dilution

1:250   1:1110   1:500  

PROTEIN ARRAY

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:500   1:120000    

ANTIGEN INFORMATION

 
 

Antibody HPA023844

 

Antibody HPA050665

 

Antibody CAB004514

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein  

Length (aa)

119   145    

Antigen sequence

SSAEVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVF
PFQYCVETDIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDG
LGSQYPLKKDSCGDQFLSV
 
SHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVY
NGPTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGS
TGHLLAHTPHSVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQP
   

Matching transcripts

NFATC3-001 - ENSP00000264008 [100%]
NFATC3-002 - ENSP00000300659 [100%]
NFATC3-003 - ENSP00000331324 [100%]
NFATC3-016 - ENSP00000456379 [100%]
NFATC3-017 - ENSP00000456120 [100%]
NFATC3-023 - ENSP00000460533 [100%]
  NFATC3-001 - ENSP00000264008 [100%]
NFATC3-002 - ENSP00000300659 [100%]
NFATC3-003 - ENSP00000331324 [100%]
NFATC3-016 - ENSP00000456379 [100%]
NFATC3-017 - ENSP00000456120 [100%]
NFATC3-023 - ENSP00000460533 [100%]
   

Other gene match

     
ANTIGEN VIEW
NFATC3-001
NFATC3-002
NFATC3-003
NFATC3-016
NFATC3-017
NFATC3-023
 

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