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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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NFATC3
  • TISSUE

  • premium

    CELL

  • CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3

Protein class

Predicted intracellular proteins, Transcription factors

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA023844
CAB004514

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Weak to moderate cytoplasmic positivity with additional membranous staining was observed in a majority of malignancies. Endometrial cancers, malignant gliomas and basal cell carcinomas in skin displayed moderate to strong membranous and cytoplasmic staining. Most malignant lymphomas and liver cancers were generally negative.

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most malignant cells showed weak to moderate cytoplasmic staining. Strong positivity was observed in a few malignant gliomas, urothelial cancers and skin cancers.

GENE INFORMATION

Gene name

NFATC3 (HGNC Symbol)

Synonyms

NFAT4, NFATX

Description

Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (HGNC Symbol)

Entrez gene summary

The product of this gene is a member of the nuclear factors of activated T cells DNA-binding transcription complex. This complex consists of at least two components: a preexisting cytosolic component that translocates to the nucleus upon T cell receptor (TCR) stimulation and an inducible nuclear component. Other members of this family participate to form this complex also. The product of this gene plays a role in the regulation of gene expression in T cells and immature thymocytes. Several transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Nov 2010]

Chromosome

16

Cytoband

q22.1

Chromosome location (bp)

68084751 - 68229259

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000072736 (version 83.38)

Entrez gene

4775

UniProt

Q12968 (UniProt - Evidence at protein level)

neXtProt

NX_Q12968

Antibodypedia

NFATC3 antibodies

PROTEIN BROWSER

NFATC3-001
NFATC3-002
NFATC3-003
NFATC3-016
NFATC3-017
NFATC3-023
NFATC3-024

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

NFATC3-001
ENSP00000264008
ENST00000349223
Q12968 [Direct mapping]
Nuclear factor of activated T-cells, cytoplasmic 3
Show all
Predicted intracellular proteins
Transcription factors
   Immunoglobulin fold
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000978 [RNA polymerase II core promoter proximal region sequence-specific DNA binding]
GO:0001077 [transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0002223 [stimulatory C-type lectin receptor signaling pathway]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0006954 [inflammatory response]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0045087 [innate immune response]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
Show all
1065 aa
115.1 kDa
No 0
NFATC3-002
ENSP00000300659
ENST00000346183
Q12968 [Direct mapping]
Nuclear factor of activated T-cells, cytoplasmic 3
B5B2S1 [Target identity:100%; Query identity:100%]
Nuclear factor of activated T-cells c3 isoform IB-deltaXa; Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3, isoform CRA_b
Show all
Predicted intracellular proteins
Transcription factors
   Immunoglobulin fold
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000978 [RNA polymerase II core promoter proximal region sequence-specific DNA binding]
GO:0001077 [transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0001228 [transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding]
GO:0001569 [patterning of blood vessels]
GO:0001666 [response to hypoxia]
GO:0001974 [blood vessel remodeling]
GO:0002223 [stimulatory C-type lectin receptor signaling pathway]
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0006954 [inflammatory response]
GO:0007507 [heart development]
GO:0008134 [transcription factor binding]
GO:0014898 [cardiac muscle hypertrophy in response to stress]
GO:0014902 [myotube differentiation]
GO:0014904 [myotube cell development]
GO:0030217 [T cell differentiation]
GO:0033173 [calcineurin-NFAT signaling cascade]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0043565 [sequence-specific DNA binding]
GO:0045087 [innate immune response]
GO:0045333 [cellular respiration]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0048538 [thymus development]
GO:0048741 [skeletal muscle fiber development]
GO:0051145 [smooth muscle cell differentiation]
GO:0055001 [muscle cell development]
GO:0071277 [cellular response to calcium ion]
GO:0071285 [cellular response to lithium ion]
GO:2001256 [regulation of store-operated calcium entry]
Show all
1075 aa
115.6 kDa
No 0
NFATC3-003
ENSP00000331324
ENST00000329524
Q12968 [Direct mapping]
Nuclear factor of activated T-cells, cytoplasmic 3
B5B2S0 [Target identity:100%; Query identity:100%]
Nuclear factor of activated T-cells c3 isoform IB-Xa; Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3, isoform CRA_a
Show all
Predicted intracellular proteins
Transcription factors
   Immunoglobulin fold
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000978 [RNA polymerase II core promoter proximal region sequence-specific DNA binding]
GO:0001077 [transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0002223 [stimulatory C-type lectin receptor signaling pathway]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0006954 [inflammatory response]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0045087 [innate immune response]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
Show all
1068 aa
115.2 kDa
No 0
NFATC3-016
ENSP00000456379
ENST00000570212
H3BRS1 [Direct mapping]
Nuclear factor of-activated T-cells, cytoplasmic 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
1060 aa
114.2 kDa
No 0
NFATC3-017
ENSP00000456120
ENST00000562926
H3BR83 [Direct mapping]
Nuclear factor of-activated T-cells, cytoplasmic 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
1053 aa
113.9 kDa
No 0
NFATC3-023
ENSP00000460533
ENST00000575270
I3L3K7 [Direct mapping]
Nuclear factor of-activated T-cells, cytoplasmic 3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
1047 aa
112.8 kDa
No 0
NFATC3-024
ENSP00000457441
ENST00000565750
H3BU30 [Direct mapping]
Nuclear factor of-activated T-cells, cytoplasmic 3
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0006355 [regulation of transcription, DNA-templated]
Show all
167 aa
18.5 kDa
No 0

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