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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2684.8TPM
GTEx:1492.9RPKM
FANTOM5:5694.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA041264

  

Antibody HPA041271

  

Antibody CAB002621

  

Adipocytes

 Medium   Low   Not detected  

Chondrocytes

 Medium   Not detected   Low  

Fibroblasts

 Medium   Not detected   Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA041264

  

Antibody HPA041271

  

Antibody CAB002621

  

Adipocytes

 Medium   Not detected   Not detected  

Fibroblasts

 Medium   Not detected   Low  

Peripheral nerve

 Not detected   Low  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

2684.8
N/A Female, age 80
Sample 1
TPM: 1818.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 979.4
N/A Female, age 57
Sample 3
TPM: 933.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 5936.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 3756.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

1492.9

GTEx sample id

RPKM
1161.01390.31767.0560.02659.205001,0001,5002,0002,5003,0003,5004,000
 
1161.01390.31767.0560.02659.205001,0001,5002,0002,5003,0003,5004,000

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 1507.8
Samples: 350

Max RPKM: 4368.5
Min RPKM: 560
Std RPKM: 480.9
Median RPKM: 1390.3
GTEX-13OW6-0526-SM-5L3HY 4368.5
GTEX-11DXW-0326-SM-5H11W 3498.3
GTEX-YECK-0226-SM-4W215 3120.0
GTEX-139YR-2426-SM-5J1OB 2756.6
GTEX-11ZUS-0726-SM-59886 2659.2
GTEX-ZE9C-2826-SM-5S2MO 2657.6
GTEX-13111-1726-SM-5EGJZ 2646.7
GTEX-13CF2-2626-SM-5LZZA 2644.1
Show all
1223.21400.41660.3653.92289.405001,0001,5002,0002,5003,000
 
1223.21400.41660.3653.92289.405001,0001,5002,0002,5003,000

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 1469.8
Samples: 227

Max RPKM: 3226.8
Min RPKM: 497.5
Std RPKM: 404.9
Median RPKM: 1400.4
GTEX-13OW7-1126-SM-5K7V6 3226.8
GTEX-133LE-0926-SM-5P9J1 2722.2
GTEX-X8HC-2326-SM-4QAS4 2719.9
GTEX-YJ89-1926-SM-5IFJ6 2611.3
GTEX-WOFM-0726-SM-3MJF8 2541.5
GTEX-1128S-0926-SM-5GZZU 2436.0
GTEX-12584-2126-SM-5FQUM 2428.7
GTEX-13X6H-1726-SM-5Q5EH 2406.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

5694.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 5694.8
FF:10010-101C1 65,65,76 years, mixed 5694.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.