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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Lab Vision/NeoMarkers
 

Product name

HPA041264   HPA041271   RB-9421  

Host species

Rabbit   Rabbit   Rabbit  

Clonality

pAb   pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Not known  

Other gene match

ACTA2 - ENSG00000107796 [96%]
ACTA1 - ENSG00000143632 [96%]
ACTC1 - ENSG00000159251 [96%]
ACTG2 - ENSG00000163017 [96%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [100%]
POTEF - ENSG00000196604 [100%]
POTEI - ENSG00000196834 [100%]
POTEJ - ENSG00000222038 [100%]
  ACTA2 - ENSG00000107796 [97%]
ACTA1 - ENSG00000143632 [97%]
ACTC1 - ENSG00000159251 [97%]
ACTG2 - ENSG00000163017 [97%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [84%]
POTEF - ENSG00000196604 [84%]
POTEI - ENSG00000196834 [84%]
POTEJ - ENSG00000222038 [84%]
   

Released in version

10   10   1  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 
Immunohistochemistry

Supported   Supported   Supported  
Western blot

Supported   Uncertain   Supported  
Protein array

Approved   Supported    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human stomach, upper shows strong membranous positivity in glandular cells.   Immunohistochemical staining of human stomach, upper shows strong membranous positivity in glandular cells.   Immunohistochemical staining of human tonsil shows strong cytoplasmic positivity in reaction center cells  

Expression

RNA: detected in 37 tissues
Protein: detected in 73 cell types
  RNA: detected in 37 tissues
Protein: detected in 37 cell types
  RNA: detected in 37 tissues
Protein: detected in 64 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:1800   1:150   1:400  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.   Mainly consistent with RNA expression data.   Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
 

     

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
    Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

121.4, 121.3, 117.4, 42.1, 42, 41.9, 41.8, 41.7, 37.1, 28.2, 26.9, 23.8, 18, 16.8   121.4, 121.3, 117.4, 42.1, 42, 41.9, 41.8, 41.7, 28.2, 26.9, 23.8, 18, 16.8, 16.3, 14.5, 13, 11.4, 11, 8.5   41.7, 18, 11.4, 11, 8.5  

Antibody dilution

1:250   1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000   1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Not known  

Length (aa)

26   37    

Antigen sequence

PKANREKMTQIMFETFNTPAMYVAIQ
 
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD
   

Matching transcripts

ACTB-001 - ENSP00000349960 [100%]
ACTB-008 - ENSP00000407473 [100%]
  ACTB-001 - ENSP00000349960 [100%]
ACTB-008 - ENSP00000407473 [100%]
ACTB-009 - ENSP00000393951 [100%]
ACTB-010 - ENSP00000401032 [100%]
ACTB-012 - ENSP00000399487 [100%]
   

Other gene match

ACTA2 - ENSG00000107796 [96%]
ACTA1 - ENSG00000143632 [96%]
ACTC1 - ENSG00000159251 [96%]
ACTG2 - ENSG00000163017 [96%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [100%]
POTEF - ENSG00000196604 [100%]
POTEI - ENSG00000196834 [100%]
POTEJ - ENSG00000222038 [100%]
  ACTA2 - ENSG00000107796 [97%]
ACTA1 - ENSG00000143632 [97%]
ACTC1 - ENSG00000159251 [97%]
ACTG2 - ENSG00000163017 [97%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [84%]
POTEF - ENSG00000196604 [84%]
POTEI - ENSG00000196834 [84%]
POTEJ - ENSG00000222038 [84%]
   
ANTIGEN VIEW
ACTB-001
ACTB-008
ACTB-009
ACTB-010
ACTB-012
 

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