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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:3469.0TPM
GTEx:3361.1RPKM
FANTOM5:7000.1Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Medium
Glandular cells:Low
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Cells in endometrial stroma

Medium   Medium   Not detected  

Glandular cells

Medium   Low   Low  
     
     
     

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Medium
Glandular cells:Low
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Cells in endometrial stroma

Medium   Medium   Not detected  

Glandular cells

High   Low   Not detected  
     
     
     

ENDOMETRIUM - HPA RNA-seq

Average TPM

3469.0

overview Female, age 34
Sample 1
TPM: 3944.6
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 2376.3
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 4917.9
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 3535.6
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 2570.5
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

3361.1

GTEx sample id

RPKM

2724.72978.24016.92395.85221.405001,0001,5002,0002,5003,0003,5004,0004,5005,000
 
2724.72978.24016.92395.85221.405001,0001,5002,0002,5003,0003,5004,0004,5005,000

Uterus - Endometrium

Uterus - Endometrium
RPKM: 3361.1
Samples: 14

Max RPKM: 5221.4
Min RPKM: 2395.8
Std RPKM: 970
Median RPKM: 2978.2
GTEX-R55G-1626-SM-48FF4 5221.4
GTEX-PWN1-2026-SM-48TD9 5155.2
GTEX-T5JW-1526-SM-4DM5E 4585.8
GTEX-13QBU-1626-SM-5LU4S 4254.0
GTEX-11EM3-1926-SM-5987U 3305.5
GTEX-T6MO-1526-SM-4DM57 3089.6
GTEX-P78B-2526-SM-3P5ZY 3009.4
GTEX-S32W-1426-SM-4AD66 2947.0
GTEX-Y114-1826-SM-4TT87 2776.7
GTEX-U3ZN-0726-SM-4DXT5 2761.2
GTEX-ZVT2-0426-SM-5E44S 2712.5
GTEX-PX3G-2026-SM-48U1H 2423.6
GTEX-XUZC-0926-SM-4BOQF 2417.0
GTEX-ZTPG-2026-SM-5O999 2395.8
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

7000.1

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 7000.1
FF:10100-102D1 23-63 years, female 7000.1

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