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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2027.4TPM
GTEx:1657.5RPKM
FANTOM5:7053.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB002621

 

Glandular cells

High   High   Low  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

2027.4

overview Male, age 65
Sample 1
TPM: 1388.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 2243.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 2382.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 2095.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

1657.5

GTEx sample id

RPKM

1192.21473.31778.5822.32450.405001,0001,5002,0002,5003,0003,5004,0004,500
 
1192.21473.31778.5822.32450.405001,0001,5002,0002,5003,0003,5004,0004,500

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 1657.5
Samples: 88

Max RPKM: 4661.8
Min RPKM: 822.3
Std RPKM: 743.3
Median RPKM: 1473.3
GTEX-111CU-1326-SM-5NQ8L 4661.8
GTEX-WEY5-1526-SM-4LMJF 4181.9
GTEX-117YX-0326-SM-5GICL 3764.0
GTEX-XMK1-1826-SM-4B66F 3752.6
GTEX-ZQUD-0926-SM-57WE3 3614.5
GTEX-ZF2S-1726-SM-57WFT 3410.8
GTEX-13111-1426-SM-5DUW3 3354.9
GTEX-WFG7-1726-SM-4LVME 2450.4
GTEX-X15G-1426-SM-4PQZK 2379.3
GTEX-1192X-2526-SM-59868 2304.6
GTEX-13FTW-2026-SM-5IJE2 2159.1
GTEX-UPK5-2026-SM-4JBIM 2153.0
GTEX-WFG8-1626-SM-4LVMB 2108.8
GTEX-13OVI-1926-SM-5IJCG 2100.9
GTEX-ZPIC-2326-SM-57WDW 2085.0
GTEX-11P82-0826-SM-5P9GU 2045.9
GTEX-XGQ4-1326-SM-4GIDU 2030.9
GTEX-12WSK-1526-SM-5CVNO 2012.9
GTEX-Y114-1426-SM-4TT6W 1937.4
GTEX-Y3IK-1726-SM-4YCCR 1930.9
GTEX-ZQG8-2526-SM-57WEQ 1854.7
GTEX-ZYFG-2026-SM-5E43Y 1831.1
GTEX-ZLV1-1126-SM-4WWBW 1761.0
GTEX-ZVT2-2126-SM-5NQ93 1753.3
GTEX-14DAR-1426-SM-5RQIR 1732.6
GTEX-11NSD-1726-SM-5N9C3 1714.1
GTEX-145LT-1026-SM-5LU9O 1711.7
GTEX-ZTX8-0526-SM-59HLD 1706.6
GTEX-ZTPG-2626-SM-57WFX 1691.6
GTEX-XUZC-1426-SM-4BRV3 1669.1
GTEX-ZVP2-1726-SM-5GU5P 1665.5
GTEX-11VI4-1626-SM-5EQKO 1659.9
GTEX-Y5LM-1626-SM-4VDTB 1649.6
GTEX-ZC5H-2326-SM-4WAYT 1630.1
GTEX-13QBU-1926-SM-5IJEW 1615.3
GTEX-14E6E-1626-SM-5RQI7 1612.0
GTEX-131XG-1726-SM-5LZUR 1542.4
GTEX-1399U-2126-SM-5IFEZ 1531.5
GTEX-11EQ9-1326-SM-5985X 1525.8
GTEX-WFJO-0926-SM-4LVM2 1514.9
GTEX-13RTK-0826-SM-5Q5C6 1482.9
GTEX-ZP4G-1626-SM-57WGD 1481.4
GTEX-ZEX8-1826-SM-57WBH 1475.1
GTEX-YB5E-1526-SM-5IFIE 1475.0
GTEX-13O61-1326-SM-5KM31 1471.7
GTEX-13FH7-1226-SM-5IJFK 1460.2
GTEX-ZZ64-0526-SM-5GZXM 1423.0
GTEX-13D11-0726-SM-5LZZB 1419.9
GTEX-XBED-1426-SM-4AT4G 1413.7
GTEX-ZTSS-0926-SM-59865 1409.7
GTEX-WRHK-1026-SM-4MVOD 1405.1
GTEX-139T6-1026-SM-5IJGC 1378.9
GTEX-13PL7-2626-SM-5IFH4 1350.4
GTEX-11DXX-1626-SM-5H11H 1347.4
GTEX-131XF-1326-SM-5GCMQ 1339.0
GTEX-Z9EW-0926-SM-5CVMM 1306.7
GTEX-YEC4-1726-SM-4W21E 1273.9
GTEX-11P7K-1626-SM-5GU63 1269.8
GTEX-ZA64-1226-SM-5HL7B 1261.2
GTEX-11XUK-1426-SM-5EQMG 1248.4
GTEX-WH7G-1626-SM-4LVMY 1247.5
GTEX-145ME-0926-SM-5O9AR 1243.8
GTEX-ZXES-1526-SM-5NQ95 1237.8
GTEX-13113-1226-SM-5EGHT 1225.7
GTEX-1122O-1326-SM-5H11F 1219.5
GTEX-ZYWO-1526-SM-5SIAL 1193.1
GTEX-XAJ8-0526-SM-47JYK 1189.5
GTEX-13O21-1026-SM-5IJDU 1177.7
GTEX-13CF3-1226-SM-5LZXN 1153.2
GTEX-133LE-1426-SM-5IFH1 1143.1
GTEX-Y9LG-1626-SM-5IFHM 1140.5
GTEX-WQUQ-2426-SM-4MVNW 1118.8
GTEX-111YS-1426-SM-5GID8 1102.0
GTEX-XXEK-1026-SM-4BRUW 1091.9
GTEX-ZVZP-1826-SM-5GZXB 1084.4
GTEX-1399R-2026-SM-5K7WN 1080.3
GTEX-VUSG-1726-SM-4KKZL 1079.2
GTEX-1399S-2026-SM-5KM4B 1067.6
GTEX-YF7O-1826-SM-5IFIU 1063.4
GTEX-139YR-2226-SM-5IFFW 1051.9
GTEX-12BJ1-1926-SM-5HL9Z 1048.6
GTEX-ZPCL-1726-SM-57WEO 1022.6
GTEX-11DXZ-1326-SM-5H11X 995.1
GTEX-VJYA-0926-SM-4KL1N 973.0
GTEX-ZLFU-1526-SM-4WWBT 899.9
GTEX-X5EB-1626-SM-4E3IV 851.5
GTEX-148VJ-2226-SM-5NQ9M 834.5
GTEX-11I78-1126-SM-5A5K5 822.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

7053.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 7053.9
FF:10024-101D6 15,40,85 years, mixed 7053.9

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