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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:11.9RPKM
FANTOM5:57.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA008759

 

Antibody HPA012602

 

Antibody CAB009403

 

Glial cells

Not detected   Not detected   Low  

Neuronal cells

Not detected   Not detected   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

11.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 11.9
Samples: 117

Max RPKM: 32.5
Min RPKM: 0.7
Std RPKM: 8.1
Median RPKM: 10.6
GTEX-T2IS-0011-R5A-SM-32QP4 32.5
GTEX-131YS-0011-R5b-SM-5K7YB 32.0
GTEX-13S7M-0011-R5b-SM-5P9HS 30.6
GTEX-1313W-0011-R5b-SM-5L3EP 28.7
GTEX-13G51-0011-R5a-SM-5L3EB 27.0
GTEX-X585-0011-R5A-SM-46MVI 26.0
GTEX-12WSC-0011-R5b-SM-5CVNS 25.6
GTEX-145MH-0011-R5a-SM-5P9JT 25.3
GTEX-UTHO-0011-R5A-SM-3GIJD 25.1
GTEX-13X6J-0011-R5b-SM-5PNWT 24.0
GTEX-WZTO-0011-R5B-SM-3NMC5 23.7
GTEX-QVJO-0011-R5A-SM-2S1QM 22.8
GTEX-145LS-0011-R5a-SM-5SI65 22.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 22.1
GTEX-1399T-0011-R5b-SM-5IJDK 21.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 21.4
GTEX-13VXU-0011-R5a-SM-5O9D7 21.4
GTEX-S7SE-0011-R5A-SM-2XCDA 20.5
GTEX-14BIM-0011-R5b-SM-5S2RM 20.1
GTEX-WL46-0011-R5A-SM-3LK6V 20.1
GTEX-WVLH-0011-R5A-SM-3MJFW 20.1
GTEX-T6MN-0011-R5A-SM-32QPD 19.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 19.6
GTEX-139TT-0011-R5b-SM-5K7W8 19.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 18.8
GTEX-13FXS-0011-R5b-SM-5LZYE 18.7
GTEX-14ABY-0011-R5b-SM-5SI7B 18.5
GTEX-13SLX-0011-R5a-SM-5O9BV 18.4
GTEX-P44H-0011-R5A-SM-2XCEX 18.3
GTEX-PVOW-0011-R5A-SM-32PL7 18.2
GTEX-11OF3-0011-R5a-SM-57WB4 17.5
GTEX-T5JC-0011-R5A-SM-32PLK 17.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 17.4
GTEX-11NV4-0011-R5a-SM-5NQ88 17.0
GTEX-ZUA1-0011-R5b-SM-51MTG 16.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 16.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 16.5
GTEX-N7MS-0011-R5a-SM-2HMK8 16.1
GTEX-TSE9-0011-R5A-SM-3DB7J 16.1
GTEX-132Q8-0011-R5a-SM-5IJDM 16.0
GTEX-Z93S-0011-R5b-SM-4RGNI 16.0
GTEX-WWYW-0011-R5A-SM-3NB3E 15.9
GTEX-13OVL-0011-R5b-SM-5L3FU 15.8
GTEX-12WSF-0011-R5a-SM-5HL8K 15.1
GTEX-13FLW-0011-R5a-SM-5LZX6 14.7
GTEX-N7MT-0011-R5a-SM-2I3G6 14.7
GTEX-11GSP-0011-R5a-SM-57WBE 14.6
GTEX-11H98-0011-R5b-SM-57WCF 14.3
GTEX-13OW6-0011-R5a-SM-5O9BK 14.2
GTEX-R55E-0011-R5A-SM-2TC5N 14.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 13.9
GTEX-13X6K-0011-R5b-SM-5PNUE 13.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 13.0
GTEX-13O3O-0011-R5b-SM-5KM44 12.9
GTEX-13X6I-0011-R5a-SM-5PNWW 11.2
GTEX-13NYB-0011-R5a-SM-5MR45 11.0
GTEX-13NYS-0011-R5a-SM-5MR4D 10.8
GTEX-RU72-0011-R5A-SM-2TF6U 10.8
GTEX-12ZZX-0011-R5a-SM-5HL89 10.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 10.5
GTEX-13OW7-0011-R5b-SM-5O9DM 10.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 10.3
GTEX-13JUV-0011-R5a-SM-5LZY5 10.0
GTEX-12WSD-0011-R5b-SM-5CVNG 9.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 9.9
GTEX-13FLV-0011-R5a-SM-5LZWT 9.6
GTEX-12WSB-0011-R5b-SM-5GU67 9.4
GTEX-13CZV-0011-R5a-SM-5K7XA 9.4
GTEX-13OW5-0011-R5b-SM-5L3FR 9.3
GTEX-13OVH-0011-R5b-SM-5KM4L 8.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 8.4
GTEX-RVPV-0011-R5A-SM-2TF69 8.4
GTEX-RVPU-0011-R5A-SM-2XCAD 8.1
GTEX-NL4W-0011-R5a-SM-2I3GD 7.6
GTEX-QMR6-0011-R5A-SM-32PKT 7.6
GTEX-14BIN-0011-R5b-SM-5SI78 7.2
GTEX-NL3H-0011-R5a-SM-2I3GB 7.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 7.1
GTEX-YFC4-0011-R5a-SM-4RGLR 6.7
GTEX-ZE7O-0011-R5a-SM-57WBO 5.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 5.8
GTEX-XOTO-0011-R5A-SM-4B657 5.6
GTEX-ZXG5-0011-R5b-SM-57WBN 5.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 5.0
GTEX-XMD1-0011-R5A-SM-4AT47 5.0
GTEX-OHPN-0011-R5A-SM-2I5FF 4.7
GTEX-12WSH-0011-R5b-SM-5P9F3 4.5
GTEX-13JVG-0011-R5a-SM-5MR4O 4.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 4.2
GTEX-12WSA-0011-R5b-SM-5GU5I 4.1
GTEX-OXRN-0011-R5A-SM-2I5EF 3.6
GTEX-13CIG-0011-R5b-SM-5L3F2 3.4
GTEX-13112-0011-R5b-SM-5DUV8 3.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 3.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 3.0
GTEX-YJ89-0011-R5a-SM-4V6GM 3.0
GTEX-11WQC-0011-R5a-SM-5BC74 2.9
GTEX-139TS-0011-R5b-SM-5J2MZ 2.9
GTEX-X261-0011-R5A-SM-3NMB4 2.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 2.7
GTEX-X4XX-0011-R5A-SM-46MWN 2.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 2.6
GTEX-ZVT3-0011-R5a-SM-51MSI 2.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 2.3
GTEX-NPJ7-0011-R5a-SM-33HBK 2.1
GTEX-144GO-0011-R5a-SM-5PNUR 2.0
GTEX-1445S-0011-R5a-SM-5PNUS 1.8
GTEX-144GL-0011-R5b-SM-5PNUJ 1.8
GTEX-139T8-0011-R5b-SM-5J1MO 1.7
GTEX-ZV68-0011-R5a-SM-4YCDW 1.7
GTEX-1477Z-0011-R5b-SM-5PNUO 1.4
GTEX-13NZA-0011-R5b-SM-5KM4K 1.1
GTEX-S7PM-0011-R5A-SM-3NM8G 1.0
GTEX-11UD1-0011-R5b-SM-5P9FP 0.8
GTEX-13CF2-0011-R5a-SM-5LZWS 0.8
GTEX-13FHP-0011-R5b-SM-5LZY2 0.8
GTEX-145MG-0011-R5b-SM-5S2VU 0.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

57.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 57.2
FF:10379-105H1 89 years, female 63.4
FF:10164-103B2 76 years, female 51.0

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