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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:38.3RPKM
FANTOM5:136.4Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA008759

 

Antibody HPA012602

 

Antibody CAB009403

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Low   Medium  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

38.3

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 38.3
Samples: 94

Max RPKM: 254.5
Min RPKM: 1.3
Std RPKM: 53.3
Median RPKM: 16.7
GTEX-13O3O-0011-R1b-SM-5KM2K 254.5
GTEX-13JUV-0011-R1a-SM-5LZY4 223.9
GTEX-131XH-0011-R1a-SM-5DUWA 206.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 177.2
GTEX-N7MS-0011-R1a-SM-2HMJG 172.3
GTEX-139TT-0011-R1a-SM-5LZVD 170.3
GTEX-YFC4-0011-R1a-SM-4V6EH 155.8
GTEX-T5JC-0011-R1A-SM-32PM6 146.6
GTEX-13G51-0011-R1a-SM-5LZYR 121.6
GTEX-13X6I-0011-R1b-SM-5PNZC 114.3
GTEX-N7MT-0011-R1a-SM-5SI7S 105.9
GTEX-13FXS-0011-R1a-SM-5K7U6 88.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 86.3
GTEX-S7SE-0011-R1A-SM-2XCDE 69.9
GTEX-PVOW-0011-R1A-SM-32PL6 65.5
GTEX-NPJ7-0011-R1a-SM-3GACT 62.0
GTEX-11ONC-0011-R1a-SM-57WD4 61.7
GTEX-X585-0011-R1B-SM-46MVE 60.6
GTEX-12WSM-0011-R1a-SM-5LZW6 56.7
GTEX-13112-0011-R1b-SM-5HL7K 54.9
GTEX-WWYW-0011-R1A-SM-3TW8G 54.6
GTEX-14ASI-0011-R1b-SM-5S2TY 47.1
GTEX-12WSE-0011-R1b-SM-5GU4V 47.0
GTEX-13OW7-0011-R1b-SM-5L3HF 44.5
GTEX-1313W-0011-R1b-SM-5EQ4A 43.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 39.8
GTEX-145MH-0011-R1b-SM-5PNWY 38.4
GTEX-RNOR-0011-R1A-SM-5SI8F 36.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 34.0
GTEX-WL46-0011-R1A-SM-3LK6M 31.9
GTEX-12WSD-0011-R1b-SM-5LZVY 30.7
GTEX-T6MN-0011-R1A-SM-32QOY 30.4
GTEX-139T8-0011-R1a-SM-5HL75 28.7
GTEX-13NYB-0011-R1b-SM-5KM4F 27.0
GTEX-1399T-0011-R1b-SM-5DUWN 25.8
GTEX-13FLW-0011-R1b-SM-5LZX2 24.5
GTEX-13N1W-0011-R1b-SM-5MR4T 22.5
GTEX-TSE9-0011-R1A-SM-3DB7E 22.0
GTEX-12WSF-0011-R1a-SM-5DUVI 21.2
GTEX-XOTO-0011-R1B-SM-4B65C 20.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 19.3
GTEX-R55E-0011-R1A-SM-2TC6N 18.8
GTEX-P44H-0011-R1A-SM-3NM8J 18.7
GTEX-131YS-0011-R1a-SM-5DUXC 18.5
GTEX-QVUS-0011-R1A-SM-3GAD2 17.7
GTEX-WZTO-0011-R1B-SM-3NMAR 17.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 16.7
GTEX-144GL-0011-R1a-SM-5PNZ5 16.7
GTEX-13S7M-0011-R1b-SM-5PNZE 16.1
GTEX-145LU-0011-R1a-SM-5Q5CE 16.1
GTEX-13N2G-0011-R1b-SM-5MR3G 14.9
GTEX-QVJO-0011-R1A-SM-2S1QI 14.6
GTEX-WVLH-0011-R1A-SM-4MVOK 14.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 14.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 14.0
GTEX-12WSH-0011-R1a-SM-5GU5V 14.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 13.3
GTEX-QDT8-0011-R1A-SM-32PKS 12.9
GTEX-X4XX-0011-R1B-SM-3P622 12.8
GTEX-145LS-0011-R1b-SM-5PNUP 11.4
GTEX-132Q8-0011-R1a-SM-5EGLK 11.3
GTEX-QMR6-0011-R1A-SM-32PKW 10.9
GTEX-YJ89-0011-R1a-SM-4RGLS 10.3
GTEX-NPJ8-0011-R1a-SM-33HCB 9.3
GTEX-13FHO-0011-R1b-SM-5KLZG 8.8
GTEX-UTHO-0011-R1A-SM-3GIJO 8.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 7.6
GTEX-13SLW-0011-R1a-SM-5S2W7 7.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 7.3
GTEX-NL3H-0011-R1a-SM-48TDJ 6.6
GTEX-13CF2-0011-R1a-SM-5LZY1 6.6
GTEX-11GSO-0011-R1b-SM-57WD3 5.3
GTEX-PWO3-0011-R1A-SM-2I5EW 5.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 5.1
GTEX-13OVL-0011-R1a-SM-5L3H5 4.9
GTEX-13QJC-0011-R1b-SM-5S2UU 4.8
GTEX-13PDP-0011-R1a-SM-5PNX5 4.2
GTEX-13OW5-0011-R1b-SM-5L3GE 3.5
GTEX-12WSB-0011-R1b-SM-5P9EY 3.3
GTEX-11UD1-0011-R1b-SM-5BC7D 3.1
GTEX-13NYS-0011-R1b-SM-5MR55 2.8
GTEX-13OW8-0011-R1a-SM-5L3HI 2.7
GTEX-11ZTS-0011-R1a-SM-5BC71 2.6
GTEX-13JVG-0011-R1a-SM-5KM32 2.3
GTEX-ZF28-0011-R1a-SM-4WWD1 2.1
GTEX-144GO-0011-R1a-SM-5PNWO 2.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 1.9
GTEX-1212Z-0011-R1b-SM-5BC72 1.8
GTEX-XMD1-0011-R1A-SM-4AT4C 1.8
GTEX-ZE7O-0011-R1a-SM-57WDM 1.8
GTEX-13FTY-0011-R1a-SM-5LZXE 1.8
GTEX-13FHP-0011-R1b-SM-5K7XL 1.4
GTEX-13NZA-0011-R1b-SM-5LUAF 1.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 1.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

136.4

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 136.4
FF:10169-103B7 60 years, female 275.3
FF:10374-105G5 89 years, female 83.6
FF:10153-102I9 76 years, female 50.4

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