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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TMC5
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.6TPM
GTEx:8.9RPKM
FANTOM5:21.5Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA040810

 

Antibody HPA042037

 

Glandular cells

Medium   Medium  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

20.6

overview Male, age 62
Sample 1
TPM: 4.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 16.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 37.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 21.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 14.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 24.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 13.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 32.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 11.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 8.9
Samples: 106

Max RPKM: 51.7
Min RPKM: 0.1
Std RPKM: 8.6
Median RPKM: 6.6
GTEX-11TUW-2126-SM-5GU7B 51.7
GTEX-S4Q7-1026-SM-4AD75 48.5
GTEX-144GM-0826-SM-5O98R 44.0
GTEX-REY6-2126-SM-48FD9 24.9
GTEX-ZY6K-1526-SM-5GZXE 24.8
GTEX-S3XE-1326-SM-4AD4H 22.1
GTEX-S33H-1826-SM-4AD65 21.5
GTEX-11WQK-2726-SM-5EQMU 20.3
GTEX-13FHO-2826-SM-5K7ZA 19.8
GTEX-139T6-1526-SM-5P9G6 19.2
GTEX-11TT1-2026-SM-5EQM8 17.9
GTEX-Q2AI-1126-SM-48U19 16.6
GTEX-12BJ1-1226-SM-5LUAE 16.5
GTEX-148VJ-1826-SM-5Q5DV 16.3
GTEX-11O72-2726-SM-5HL6K 14.9
GTEX-WFG7-1826-SM-3GIL1 14.8
GTEX-ZPU1-2026-SM-57WFI 14.3
GTEX-YJ8A-1126-SM-5IFJU 14.1
GTEX-WFG8-1826-SM-4LVM4 13.7
GTEX-ZLFU-1726-SM-4WWBU 13.4
GTEX-V1D1-1926-SM-4JBGX 13.1
GTEX-QMRM-1426-SM-4R1K8 12.9
GTEX-XMK1-1026-SM-4B65H 12.8
GTEX-146FQ-1726-SM-5QGPX 11.6
GTEX-SJXC-2026-SM-4DM6N 10.9
GTEX-1399R-0526-SM-5IJEF 10.5
GTEX-ZTX8-1026-SM-5EGHD 10.4
GTEX-13O61-1726-SM-5KM46 10.2
GTEX-NFK9-2226-SM-3MJGP 10.2
GTEX-PLZ6-1126-SM-3P5ZR 10.1
GTEX-145LV-1226-SM-5S2QH 10.0
GTEX-XPVG-2026-SM-4B65E 9.6
GTEX-WFON-1626-SM-4LVMV 9.3
GTEX-117YX-1526-SM-5H12T 9.1
GTEX-13FTW-1226-SM-5LZZ1 9.1
GTEX-VJYA-1226-SM-3GIJ6 9.1
GTEX-U4B1-1426-SM-4DXTX 8.9
GTEX-XOTO-2826-SM-4B65I 8.9
GTEX-SNOS-1026-SM-4DM4Y 8.7
GTEX-UTHO-2726-SM-4JBH9 8.6
GTEX-111CU-1526-SM-5N9FS 8.4
GTEX-YF7O-1926-SM-4W1YQ 8.4
GTEX-RWSA-2026-SM-47JX8 8.3
GTEX-ZUA1-2826-SM-59HLE 8.2
GTEX-OIZH-2026-SM-3NB1M 7.9
GTEX-132NY-2826-SM-5P9G2 7.7
GTEX-QV31-1026-SM-4R1K3 7.7
GTEX-QLQ7-1326-SM-4R1JY 7.4
GTEX-S95S-1026-SM-4B64M 7.0
GTEX-ZVP2-0826-SM-59HJ6 7.0
GTEX-U3ZM-0926-SM-4DXSW 6.9
GTEX-Y9LG-1826-SM-4VBQC 6.9
GTEX-145LT-0626-SM-5O99E 6.7
GTEX-11DYG-2526-SM-5N9BB 6.6
GTEX-111FC-2026-SM-5GZYO 6.5
GTEX-14ABY-0726-SM-5Q5DF 6.4
GTEX-U8XE-2526-SM-4E3IT 6.2
GTEX-12C56-1326-SM-5FQSV 6.1
GTEX-13FXS-2826-SM-5LZYC 6.1
GTEX-11NSD-0826-SM-5986S 5.9
GTEX-1399T-1226-SM-5P9J5 5.9
GTEX-14E6E-1126-SM-5S2R4 5.7
GTEX-13NYS-1026-SM-5KLZT 5.5
GTEX-WOFM-0326-SM-4OOSL 5.5
GTEX-ZDYS-1226-SM-5IJF3 5.4
GTEX-ZZ64-0926-SM-5E44L 5.2
GTEX-SNMC-0926-SM-4DM5U 5.1
GTEX-XQ3S-2526-SM-4BOOG 5.0
GTEX-WH7G-1726-SM-4LVKY 4.9
GTEX-WZTO-0926-SM-4PQZ3 4.9
GTEX-132QS-1126-SM-5P9GC 4.8
GTEX-Y8E4-2126-SM-5RQHO 4.7
GTEX-11OF3-1726-SM-5GU5Q 4.6
GTEX-117YW-1426-SM-5EGGO 4.4
GTEX-14BMV-2326-SM-5RQJ4 4.4
GTEX-RM2N-1126-SM-48FCY 4.4
GTEX-T8EM-1826-SM-4DM7F 4.4
GTEX-ZT9W-1626-SM-4YCDQ 4.4
GTEX-YB5E-1826-SM-5IFI4 4.3
GTEX-QEG4-2226-SM-4R1JM 4.0
GTEX-11P82-1126-SM-5BC5K 3.6
GTEX-11P7K-0626-SM-5985Z 3.4
GTEX-X5EB-1826-SM-4E3K8 3.3
GTEX-13N2G-1826-SM-5KM1I 3.1
GTEX-OOBJ-2026-SM-3NB1R 3.1
GTEX-V955-1826-SM-4JBIL 3.1
GTEX-U412-2026-SM-4DXSI 2.6
GTEX-111YS-1726-SM-5GIED 2.5
GTEX-11ZUS-2126-SM-5N9E6 2.5
GTEX-XAJ8-0626-SM-47JY4 2.5
GTEX-ZTTD-2726-SM-57WFA 2.5
GTEX-QV44-1526-SM-4R1KI 2.4
GTEX-12ZZZ-2026-SM-5LZWJ 2.3
GTEX-11EQ9-1726-SM-5HL6U 2.1
GTEX-13OW8-0426-SM-5J2NR 2.1
GTEX-131XF-1926-SM-5DUW4 1.9
GTEX-OOBK-2025-SM-3LK5S 1.9
GTEX-13O21-1126-SM-5N9EV 1.8
GTEX-12696-2226-SM-5EQ65 0.9
GTEX-13G51-2326-SM-5LZXV 0.8
GTEX-XGQ4-1826-SM-4AT6F 0.8
GTEX-14C5O-2826-SM-5RQI6 0.6
GTEX-13111-1326-SM-5GCNO 0.5
GTEX-NPJ8-2426-SM-3MJHL 0.5
GTEX-13RTJ-2126-SM-5S2PZ 0.4
GTEX-WK11-2626-SM-4OOSK 0.1
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

21.5

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 21.5
FF:10022-101D4 73,79,93 years, male 21.5

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