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GLI3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.4TPM
GTEx:6.1RPKM
FANTOM5:15.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA005534

  

Endothelial cells

 Not detected  

Glandular cells

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

2.4
overview Male, age 54
Sample 1
TPM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 5.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 1.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 1.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 4.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 1.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 2.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 3.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 2.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 9.0
Samples: 149

Max RPKM: 18.1
Min RPKM: 2.1
Std RPKM: 2.5
Median RPKM: 8.6
GTEX-11I78-1326-SM-5PNY9 18.1
GTEX-131XG-1526-SM-5GCNQ 17.5
GTEX-13O61-1526-SM-5KM3P 16.8
GTEX-12WSG-2426-SM-5EQLZ 14.1
GTEX-14A5H-1626-SM-5SIAN 13.8
GTEX-ZTTD-2626-SM-57WEX 13.2
GTEX-13PVQ-2726-SM-5L3H7 12.9
GTEX-ZPU1-1726-SM-4WWFV 12.9
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 14
Min RPKM: 0.2
Std RPKM: 3.3
Median RPKM: 2.8
GTEX-ZV6S-1226-SM-59HLH 14.0
GTEX-13U4I-2426-SM-5LU34 13.7
GTEX-13FH7-1526-SM-5J2N6 12.1
GTEX-QLQ7-1126-SM-4R1KN 12.0
GTEX-ZYFG-1926-SM-5GID5 11.1
GTEX-11ONC-2026-SM-5HL61 10.7
GTEX-111YS-1626-SM-5GZZ9 10.6
GTEX-Y114-1526-SM-4TT79 10.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.7
FF:10014-101C5 62,83,84 years, mixed 15.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.