Tissue expression of EDEM3 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	16.1	TPM
GTEx:	7.5	RPKM
FANTOM5:	25.1	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Peripheral nerve:	Low

Antibody staining	Antibody HPA025754	Antibody HPA025755
Fibroblasts	Not detected	Not detected
Peripheral nerve	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Not detected
Fibroblasts:	Not detected

Antibody staining	Antibody HPA025754	Antibody HPA025755
Adipocytes	Not detected	Medium
Chondrocytes	Not detected	Not detected
Fibroblasts	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	16.1

Female, age 80

Sample 1
TPM: 14.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 12.8

Female, age 57

Sample 3
TPM: 11.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 19.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 22.9

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 6.9

Samples: 350

Max RPKM: 14.3
Min RPKM: 3
Std RPKM: 1.6
Median RPKM: 6.7

GTEX-13NYS-0226-SM-5MR49

14.3

GTEX-POYW-0726-SM-2XCEO

12.4

GTEX-SNMC-1326-SM-2XCFK

12.1

GTEX-O5YT-0226-SM-32PK5

12.0

GTEX-ZLV1-1826-SM-5FQU5

11.9

GTEX-ZE7O-0226-SM-5S2N1

11.1

GTEX-144FL-0226-SM-5Q5D4

11.0

GTEX-RM2N-1726-SM-2TF55

11.0

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 8.4

Samples: 227

Max RPKM: 16
Min RPKM: 3.4
Std RPKM: 2.4
Median RPKM: 8.1

GTEX-ZF3C-1026-SM-5S2OC

16.0

GTEX-ZAJG-1626-SM-5HL7I

15.6

GTEX-13S86-0926-SM-5SI6I

15.3

GTEX-132AR-0526-SM-5J2MJ

15.2

GTEX-13FHO-2026-SM-5J1OA

15.1

GTEX-ZDTS-1826-SM-5S2N6

14.6

GTEX-13NYS-0726-SM-5J1OR

13.8

GTEX-13O3P-0926-SM-5IFFI

13.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	25.1

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 25.1

FF:10010-101C1

65,65,76 years, mixed

25.1