We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SLC2A1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:34.0RPKM
FANTOM5:90.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA031345

 

Antibody HPA058494

 

Antibody CAB002759

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Low  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

34.0

GTEx sample id

RPKM

23.332.741.910.265.001020304050607080
 
23.332.741.910.265.001020304050607080

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 34.0
Samples: 117

Max RPKM: 84.7
Min RPKM: 10.2
Std RPKM: 14
Median RPKM: 32.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 84.7
GTEX-X585-0011-R5A-SM-46MVI 73.4
GTEX-X261-0011-R5A-SM-3NMB4 73.3
GTEX-13X6I-0011-R5a-SM-5PNWW 72.8
GTEX-XMD1-0011-R5A-SM-4AT47 65.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 61.3
GTEX-QMR6-0011-R5A-SM-32PKT 57.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 55.5
GTEX-RVPV-0011-R5A-SM-2TF69 54.1
GTEX-X4XX-0011-R5A-SM-46MWN 53.4
GTEX-N7MT-0011-R5a-SM-2I3G6 52.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 51.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 50.8
GTEX-13NZA-0011-R5b-SM-5KM4K 50.0
GTEX-11H98-0011-R5b-SM-57WCF 49.1
GTEX-13JVG-0011-R5a-SM-5MR4O 48.6
GTEX-NL4W-0011-R5a-SM-2I3GD 47.9
GTEX-WWYW-0011-R5A-SM-3NB3E 47.9
GTEX-WL46-0011-R5A-SM-3LK6V 47.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 46.6
GTEX-13FLV-0011-R5a-SM-5LZWT 45.8
GTEX-OHPN-0011-R5A-SM-2I5FF 45.6
GTEX-XOTO-0011-R5A-SM-4B657 45.2
GTEX-13OW5-0011-R5b-SM-5L3FR 44.5
GTEX-139TS-0011-R5b-SM-5J2MZ 43.7
GTEX-N7MS-0011-R5a-SM-2HMK8 43.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 43.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 43.1
GTEX-ZVT3-0011-R5a-SM-51MSI 42.3
GTEX-1477Z-0011-R5b-SM-5PNUO 41.9
GTEX-1445S-0011-R5a-SM-5PNUS 41.8
GTEX-13OW6-0011-R5a-SM-5O9BK 41.1
GTEX-13NYB-0011-R5a-SM-5MR45 40.6
GTEX-QVJO-0011-R5A-SM-2S1QM 40.1
GTEX-P44H-0011-R5A-SM-2XCEX 39.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 39.2
GTEX-144GL-0011-R5b-SM-5PNUJ 38.7
GTEX-14BIN-0011-R5b-SM-5SI78 38.0
GTEX-12ZZX-0011-R5a-SM-5HL89 37.9
GTEX-RVPU-0011-R5A-SM-2XCAD 37.6
GTEX-T5JC-0011-R5A-SM-32PLK 37.2
GTEX-13S7M-0011-R5b-SM-5P9HS 37.0
GTEX-13NYS-0011-R5a-SM-5MR4D 36.8
GTEX-11UD1-0011-R5b-SM-5P9FP 36.7
GTEX-R55E-0011-R5A-SM-2TC5N 36.6
GTEX-NPJ7-0011-R5a-SM-33HBK 36.5
GTEX-13X6K-0011-R5b-SM-5PNUE 36.3
GTEX-139T8-0011-R5b-SM-5J1MO 36.1
GTEX-13JUV-0011-R5a-SM-5LZY5 35.7
GTEX-WZTO-0011-R5B-SM-3NMC5 34.7
GTEX-12WSF-0011-R5a-SM-5HL8K 34.5
GTEX-145LS-0011-R5a-SM-5SI65 34.4
GTEX-132Q8-0011-R5a-SM-5IJDM 34.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 34.1
GTEX-S7PM-0011-R5A-SM-3NM8G 34.0
GTEX-WVLH-0011-R5A-SM-3MJFW 33.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 33.0
GTEX-13SLX-0011-R5a-SM-5O9BV 32.9
GTEX-13O3O-0011-R5b-SM-5KM44 32.7
GTEX-13112-0011-R5b-SM-5DUV8 32.6
GTEX-12WSD-0011-R5b-SM-5CVNG 31.8
GTEX-14BIM-0011-R5b-SM-5S2RM 31.5
GTEX-13OW7-0011-R5b-SM-5O9DM 31.3
GTEX-1399T-0011-R5b-SM-5IJDK 31.2
GTEX-12WSB-0011-R5b-SM-5GU67 30.8
GTEX-13FHP-0011-R5b-SM-5LZY2 30.6
GTEX-13OVH-0011-R5b-SM-5KM4L 30.3
GTEX-13OVL-0011-R5b-SM-5L3FU 30.3
GTEX-RU72-0011-R5A-SM-2TF6U 30.3
GTEX-144GO-0011-R5a-SM-5PNUR 29.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 28.4
GTEX-13CF2-0011-R5a-SM-5LZWS 28.1
GTEX-NL3H-0011-R5a-SM-2I3GB 28.0
GTEX-11GSP-0011-R5a-SM-57WBE 27.9
GTEX-145MH-0011-R5a-SM-5P9JT 27.6
GTEX-13VXU-0011-R5a-SM-5O9D7 27.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 27.3
GTEX-14ABY-0011-R5b-SM-5SI7B 26.1
GTEX-PVOW-0011-R5A-SM-32PL7 25.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 25.6
GTEX-131YS-0011-R5b-SM-5K7YB 25.3
GTEX-ZUA1-0011-R5b-SM-51MTG 24.8
GTEX-13FLW-0011-R5a-SM-5LZX6 24.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 24.2
GTEX-YFC4-0011-R5a-SM-4RGLR 24.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 23.9
GTEX-UTHO-0011-R5A-SM-3GIJD 23.4
GTEX-11WQC-0011-R5a-SM-5BC74 23.3
GTEX-13CIG-0011-R5b-SM-5L3F2 23.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 22.8
GTEX-S7SE-0011-R5A-SM-2XCDA 22.6
GTEX-ZV68-0011-R5a-SM-4YCDW 22.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 22.2
GTEX-13FXS-0011-R5b-SM-5LZYE 21.8
GTEX-ZE7O-0011-R5a-SM-57WBO 21.4
GTEX-TSE9-0011-R5A-SM-3DB7J 20.9
GTEX-1313W-0011-R5b-SM-5L3EP 20.7
GTEX-ZXG5-0011-R5b-SM-57WBN 20.2
GTEX-11NV4-0011-R5a-SM-5NQ88 19.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 19.1
GTEX-11OF3-0011-R5a-SM-57WB4 19.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 19.0
GTEX-OXRN-0011-R5A-SM-2I5EF 18.6
GTEX-12WSA-0011-R5b-SM-5GU5I 18.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 18.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.1
GTEX-13CZV-0011-R5a-SM-5K7XA 18.0
GTEX-13X6J-0011-R5b-SM-5PNWT 17.3
GTEX-13G51-0011-R5a-SM-5L3EB 16.9
GTEX-T2IS-0011-R5A-SM-32QP4 16.5
GTEX-145MG-0011-R5b-SM-5S2VU 16.3
GTEX-12WSC-0011-R5b-SM-5CVNS 16.0
GTEX-T6MN-0011-R5A-SM-32QPD 14.3
GTEX-Z93S-0011-R5b-SM-4RGNI 13.1
GTEX-12WSH-0011-R5b-SM-5P9F3 12.9
GTEX-139TT-0011-R5b-SM-5K7W8 12.5
GTEX-YJ89-0011-R5a-SM-4V6GM 10.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

90.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 90.5
FF:10164-103B2 76 years, female 115.2
FF:10379-105H1 89 years, female 65.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.