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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:47.3TPM
GTEx:9.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA051282

 

Antibody HPA055838

 

Antibody CAB001515

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Low  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Not detected   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

47.3

N/A Male, age 5
Sample 1
TPM: 45.5
overview Female, age 40
Sample 2
TPM: 53.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 42.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

9.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 10.3
Samples: 114

Max RPKM: 22.9
Min RPKM: 3.2
Std RPKM: 3.6
Median RPKM: 9.9
GTEX-13JVG-3126-SM-5L3FH 22.9
GTEX-144FL-3026-SM-5O99C 22.6
GTEX-NPJ8-1526-SM-2D7VU 20.9
GTEX-13OVJ-2826-SM-5L3GW 19.9
GTEX-PWO3-0926-SM-2I5EY 18.6
GTEX-13IVO-2926-SM-5L3CZ 17.6
GTEX-13G51-3026-SM-5IJB8 16.1
GTEX-1192X-3126-SM-5N9BY 15.2
GTEX-QVUS-2826-SM-3GADB 15.0
GTEX-13OW7-3026-SM-5L3GY 14.9
GTEX-1445S-3026-SM-5O9BR 14.8
GTEX-ZE7O-3126-SM-5HL5X 14.7
GTEX-11WQK-3026-SM-5EQL6 14.5
GTEX-QDT8-2926-SM-32PKC 14.5
GTEX-OXRN-2426-SM-2I5EQ 14.2
GTEX-139T8-1026-SM-5J2MC 14.1
GTEX-11GSP-3226-SM-5986O 14.0
GTEX-NPJ7-2726-SM-2I3FT 13.9
GTEX-ZZPT-3026-SM-5GZXH 13.8
GTEX-13JUV-2926-SM-5LZX7 13.7
GTEX-N7MT-1126-SM-5SI7V 13.0
GTEX-12ZZZ-3026-SM-5BC67 12.9
GTEX-13FHP-3026-SM-5IJBS 12.9
GTEX-13X6K-2926-SM-5Q5D5 12.9
GTEX-12WSD-3126-SM-5HL7P 12.8
GTEX-13NYS-3126-SM-5KLYV 12.6
GTEX-RU72-3026-SM-5SI7Y 12.5
GTEX-11EI6-3026-SM-5GZZO 12.4
GTEX-12ZZW-2926-SM-5LZUP 12.4
GTEX-1128S-2726-SM-5H12C 12.3
GTEX-11TTK-2926-SM-5PNYP 12.3
GTEX-13QIC-2926-SM-5J2NF 12.3
GTEX-X4XX-3026-SM-3NMB2 12.3
GTEX-13OW6-3026-SM-5J2MI 12.2
GTEX-QMR6-1426-SM-32PLA 12.2
GTEX-131XW-3126-SM-5LZUC 11.6
GTEX-13PL6-3126-SM-5LUAR 11.5
GTEX-ZVT3-3026-SM-5E43N 11.5
GTEX-12ZZY-3026-SM-5GCOU 11.4
GTEX-132Q8-3026-SM-5PNVG 11.4
GTEX-ZAK1-3026-SM-5S2MJ 11.4
GTEX-11NUK-2926-SM-5A5MD 11.2
GTEX-11O72-2926-SM-5BC4V 11.2
GTEX-11EMC-3226-SM-5EGKW 11.1
GTEX-14A5I-2926-SM-5Q5CQ 11.0
GTEX-111FC-3126-SM-5GZZ2 10.6
GTEX-UTHO-3026-SM-3GAFB 10.6
GTEX-11DXW-1126-SM-5H12Q 10.5
GTEX-12WSA-2926-SM-5EQ4D 10.5
GTEX-13OW8-2826-SM-5L3GC 10.3
GTEX-11OC5-0726-SM-5P9JK 10.2
GTEX-145LS-3126-SM-5Q5BY 10.2
GTEX-R55F-1326-SM-5S2V4 10.1
GTEX-13PVQ-3026-SM-5SI93 10.0
GTEX-145MG-3026-SM-5RQJA 10.0
GTEX-QVJO-1426-SM-2S1QY 10.0
GTEX-11GSO-2926-SM-5HL73 9.9
GTEX-11ONC-2926-SM-5P9JM 9.8
GTEX-1399T-3026-SM-5KLZC 9.7
GTEX-11GS4-3126-SM-5A5LH 9.6
GTEX-WZTO-2926-SM-3NM9I 9.6
GTEX-14BMV-3026-SM-5S2PQ 9.3
GTEX-XLM4-3026-SM-4AT6L 9.3
GTEX-ZAJG-3126-SM-5HL9J 9.2
GTEX-145MF-2726-SM-5O995 9.1
GTEX-11DXY-3226-SM-5GIDE 8.9
GTEX-13OVH-3026-SM-5MR4N 8.9
GTEX-13NYB-3026-SM-5IJD7 8.8
GTEX-Q2AG-2926-SM-2HMJ3 8.7
GTEX-RNOR-2326-SM-2TF4I 8.7
GTEX-13S7M-3126-SM-5RQJQ 8.6
GTEX-1117F-3226-SM-5N9CT 8.5
GTEX-13NYC-2826-SM-5K7WR 8.5
GTEX-13FHO-3026-SM-5J1O9 8.4
GTEX-WWYW-3126-SM-3NB39 8.4
GTEX-11PRG-2926-SM-5987A 8.3
GTEX-Y111-2726-SM-4TT3N 8.3
GTEX-13FLW-1426-SM-5K7YE 8.2
GTEX-147GR-3026-SM-5S2ML 8.1
GTEX-12126-1026-SM-5P9JJ 8.0
GTEX-144GL-3026-SM-5Q5CW 8.0
GTEX-TSE9-3026-SM-3DB76 8.0
GTEX-131YS-3126-SM-5KLYT 7.9
GTEX-XOTO-3026-SM-4B65M 7.9
GTEX-12WSH-3026-SM-5CVNI 7.8
GTEX-13FXS-3126-SM-5J2NN 7.8
GTEX-WHSE-3026-SM-3P5ZH 7.8
GTEX-YJ89-3026-SM-5IFJI 7.8
GTEX-13X6J-3026-SM-5Q5CU 7.7
GTEX-14ASI-3026-SM-5S2PN 7.7
GTEX-YFC4-3126-SM-5PNV6 7.7
GTEX-X585-3026-SM-46MWF 7.6
GTEX-11NV4-2126-SM-5N9DS 7.5
GTEX-T2IS-3026-SM-32QPM 7.5
GTEX-Y8DK-0826-SM-4TT3T 7.2
GTEX-ZUA1-3026-SM-59HJC 7.2
GTEX-13O3Q-2926-SM-5KM45 7.1
GTEX-12ZZX-2926-SM-5GCOQ 7.0
GTEX-1313W-3126-SM-5LZUI 6.8
GTEX-145MH-3026-SM-5Q5DZ 6.8
GTEX-13SLX-3126-SM-5S2Q5 6.6
GTEX-T5JC-2426-SM-3NMDB 6.4
GTEX-13O3O-3126-SM-5KM3H 6.3
GTEX-117XS-3026-SM-5N9CA 6.2
GTEX-12WSC-3026-SM-5GCNF 6.2
GTEX-ZYFD-3026-SM-5E44C 6.0
GTEX-T6MN-2626-SM-32PMQ 5.9
GTEX-WVLH-3026-SM-3MJG9 5.9
GTEX-WL46-2926-SM-3LK82 5.1
GTEX-13VXU-2926-SM-5LU5C 4.7
GTEX-PVOW-2526-SM-2XCF7 4.7
GTEX-11ZUS-2926-SM-5FQSL 4.2
GTEX-11OF3-2926-SM-5HL78 3.5
GTEX-Z93S-2926-SM-57WB9 3.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 9.1
Samples: 108

Max RPKM: 22.2
Min RPKM: 2.8
Std RPKM: 4
Median RPKM: 8.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 22.2
GTEX-1445S-0011-R10a-SM-5PNWB 22.2
GTEX-QVUS-0011-R10A-SM-3GIK3 19.6
GTEX-XMD1-0011-R10A-SM-4AT4A 17.4
GTEX-12WSD-0011-R10b-SM-5GU79 16.8
GTEX-1477Z-0011-R10b-SM-5S2RF 16.8
GTEX-11WQC-0011-R10a-SM-57WCT 16.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 15.8
GTEX-11H98-0011-R10b-SM-5NQ98 15.1
GTEX-NL4W-0011-R10A-SM-2I3DY 15.1
GTEX-11WQK-0011-R10a-SM-5BC6R 14.6
GTEX-139TS-0011-R10a-SM-5K7TU 14.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 14.3
GTEX-13JUV-0011-R10b-SM-5LZXR 14.0
GTEX-13SLW-0011-R10a-SM-5S2UI 13.8
GTEX-ZV68-0011-R10a-SM-51MT7 13.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 13.6
GTEX-QDT8-0011-R10A-SM-32PKG 13.5
GTEX-145LU-0011-R10a-SM-5PNWJ 13.3
GTEX-13JVG-0011-R10b-SM-5KM2P 12.9
GTEX-13OW8-0011-R10a-SM-5L3H6 12.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.8
GTEX-OXRO-0011-R10A-SM-2I5EH 11.6
GTEX-OXRN-0011-R10A-SM-2I5GC 11.5
GTEX-12WSA-0011-R10b-SM-5P9ET 11.4
GTEX-14BIL-0011-R10a-SM-5SI75 11.3
GTEX-QMR6-0011-R10A-SM-32PKO 11.2
GTEX-13N2G-0011-R10a-SM-5MR34 11.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 10.9
GTEX-14753-0011-R10b-SM-5S2WE 10.9
GTEX-13X6K-0011-R10a-SM-5P9JR 10.6
GTEX-13OW6-0011-R10a-SM-5L3HE 10.3
GTEX-12WSM-0011-R10a-SM-5DUWV 10.0
GTEX-147F4-0011-R10b-SM-5S2WC 10.0
GTEX-WWYW-0011-R10A-SM-3NB35 10.0
GTEX-P44H-0011-R10A-SM-2XCEK 9.9
GTEX-ZF28-0011-R10a-SM-4WWEH 9.9
GTEX-11ZUS-0011-R10b-SM-5BC79 9.8
GTEX-12126-0011-R10b-SM-5BC6T 9.8
GTEX-ZUA1-0011-R10a-SM-51MT6 9.8
GTEX-TSE9-0011-R10A-SM-3DB7O 9.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 9.5
GTEX-13FHO-0011-R10b-SM-5J2MM 9.4
GTEX-13NYS-0011-R10a-SM-5MR4S 9.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 9.2
GTEX-13FLW-0011-R10b-SM-5LZZF 9.2
GTEX-X4XX-0011-R10B-SM-46MWO 9.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 9.1
GTEX-13X6I-0011-R10a-SM-5PNWI 9.1
GTEX-XLM4-0011-R10A-SM-4AT5P 8.8
GTEX-13G51-0011-R10b-SM-5LZYF 8.7
GTEX-13OVL-0011-R10a-SM-5L3GS 8.7
GTEX-RVPU-0011-R10A-SM-2XCAH 8.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 8.6
GTEX-X261-0011-R10B-SM-4E3JT 8.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 8.4
GTEX-ZVT3-0011-R10b-SM-57WB6 8.4
GTEX-13IVO-0011-R10a-SM-5LZY3 8.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 8.2
GTEX-13QJC-0011-R10a-SM-5SI63 8.1
GTEX-S7SE-0011-R10A-SM-2XCDF 8.1
GTEX-ZXG5-0011-R10a-SM-57WDD 8.1
GTEX-N7MT-0011-R10A-SM-2I3E1 7.9
GTEX-T5JC-0011-R10A-SM-32PM2 7.9
GTEX-13FXS-0011-R10a-SM-5J2MA 7.6
GTEX-145MG-0011-R10a-SM-5PNWG 7.6
GTEX-131XW-0011-R10a-SM-5DUVA 7.5
GTEX-13NZA-0011-R10b-SM-5KM54 7.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 7.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 7.4
GTEX-X4EP-0011-R10B-SM-4QASJ 7.4
GTEX-12WSF-0011-R10a-SM-5LZVH 7.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 7.3
GTEX-147GR-0011-R10b-SM-5S2UM 7.1
GTEX-13S7M-0011-R10b-SM-5PNZB 6.9
GTEX-YJ89-0011-R10a-SM-4SOK9 6.9
GTEX-13CZV-0011-R10b-SM-5LZYD 6.8
GTEX-YFC4-0011-R10a-SM-4SOK5 6.8
GTEX-13QIC-0011-R10a-SM-5O9C7 6.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 6.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 6.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 6.3
GTEX-12WSH-0011-R10a-SM-5LZUS 6.2
GTEX-145LS-0011-R10a-SM-5PNUQ 6.2
GTEX-13NYB-0011-R10a-SM-5KM43 6.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 6.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 5.9
GTEX-WVLH-0011-R10A-SM-3MJFM 5.7
GTEX-131XH-0011-R10a-SM-5EGLJ 5.4
GTEX-13O3Q-0011-R10b-SM-5KM39 5.2
GTEX-13OW7-0011-R10a-SM-5L3H3 5.2
GTEX-131YS-0011-R10b-SM-5EQ5N 5.0
GTEX-14BIN-0011-R10a-SM-5S2UA 5.0
GTEX-WZTO-0011-R10B-SM-4E3KB 4.7
GTEX-N7MS-0011-R10A-SM-2HMJK 4.4
GTEX-Z93S-0011-R10a-SM-4RGNM 4.3
GTEX-T6MN-0011-R10A-SM-32QP7 4.2
GTEX-13N1W-0011-R10b-SM-5MR4H 4.1
GTEX-145MH-0011-R10b-SM-5PNUK 4.0
GTEX-13X6J-0011-R10b-SM-5PNWA 3.9
GTEX-NL3H-0011-R10A-SM-2I3E9 3.9
GTEX-13O3O-0011-R10a-SM-5LUA9 3.7
GTEX-WL46-0011-R10A-SM-3MJFQ 3.7
GTEX-X585-0011-R10A-SM-46MUY 3.7
GTEX-12WSC-0011-R10a-SM-5GU57 3.3
GTEX-12WSE-0011-R10b-SM-5P9JV 3.3
GTEX-13SLX-0011-R10a-SM-5P9HV 3.3
GTEX-1313W-0011-R10b-SM-5DUXA 2.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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