Tissue expression of SYNE1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	32.1	TPM
GTEx:	8.6	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Medium
Neuronal cells:	High
Neuropil:	Medium

Antibody staining	Antibody HPA019113
Endothelial cells	Medium
Glial cells	Medium
Neuronal cells	High
Neuropil	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	32.1

Male, age 5

Sample 1
TPM: 48.6

Female, age 40

Sample 2
TPM: 21.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 26.3

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	8.6

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 8.9

Samples: 114

Max RPKM: 31.6
Min RPKM: 4.1
Std RPKM: 2.7
Median RPKM: 8.8

GTEX-11OF3-2926-SM-5HL78

31.6

GTEX-13FXS-3126-SM-5J2NN

16.1

GTEX-PVOW-2526-SM-2XCF7

12.7

GTEX-QMR6-1426-SM-32PLA

12.0

GTEX-ZAK1-3026-SM-5S2MJ

11.9

GTEX-12WSD-3126-SM-5HL7P

11.5

GTEX-14ASI-3026-SM-5S2PN

11.4

GTEX-X4XX-3026-SM-3NMB2

11.3

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 8.2

Samples: 108

Max RPKM: 15.1
Min RPKM: 2.9
Std RPKM: 2.1
Median RPKM: 8.6

GTEX-QDT8-0011-R10A-SM-32PKG

15.1

GTEX-14BIL-0011-R10a-SM-5SI75

11.9

GTEX-QMR6-0011-R10A-SM-32PKO

11.9

GTEX-WL46-0011-R10A-SM-3MJFQ

11.9

GTEX-NPJ8-0011-R10A-SM-2YUMO

11.6

GTEX-Q2AG-0011-R10A-SM-2HMLA

11.5

GTEX-NPJ7-0011-R10A-SM-2I3E5

11.4

GTEX-QVJO-0011-R10A-SM-2S1QJ

11.1

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue