We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TOP2A
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:12.1TPM
GTEx:10.6RPKM
FANTOM5:23.6Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA006458

 

Antibody HPA026773

 

Antibody CAB002448

 

Squamous epithelial cells

Medium   Medium   Medium  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

12.1

overview Female, age 70
Sample 1
TPM: 10.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 12.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 13.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

10.6

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 10.6
Samples: 286

Max RPKM: 50.8
Min RPKM: 0.6
Std RPKM: 6.5
Median RPKM: 9
GTEX-133LE-0626-SM-5IFFJ 50.8
GTEX-RU72-0726-SM-46MUW 42.9
GTEX-TMMY-1126-SM-4DXSX 34.6
GTEX-WFJO-0826-SM-4LVM5 31.8
GTEX-12WSL-1526-SM-5GCP8 30.4
GTEX-146FQ-1026-SM-5LU8I 30.0
GTEX-RUSQ-0826-SM-47JWW 29.7
GTEX-Y111-1626-SM-57WCY 28.6
GTEX-111YS-0926-SM-5EGGI 26.7
GTEX-ZT9X-0526-SM-5GCOP 26.0
GTEX-146FH-1726-SM-5QGQ2 25.4
GTEX-13X6H-1326-SM-5LU42 25.3
GTEX-Y8E4-1726-SM-5LU9G 25.0
GTEX-14E6E-0726-SM-5S2R3 24.5
GTEX-Y5V6-1026-SM-4VBS2 23.8
GTEX-131XF-0826-SM-5GICG 23.6
GTEX-1399U-1026-SM-5J1OC 21.1
GTEX-Y8LW-0726-SM-5IFI1 21.1
GTEX-V955-1126-SM-4JBH3 21.0
GTEX-144GO-2726-SM-5O9A2 20.5
GTEX-ZTX8-0226-SM-5E44D 20.4
GTEX-XGQ4-1526-SM-4AT6H 19.9
GTEX-ZYWO-1026-SM-5E45U 19.9
GTEX-11LCK-1726-SM-5S2OQ 19.8
GTEX-11EMC-2226-SM-5A5JW 19.6
GTEX-11DXX-1126-SM-5GZZK 18.5
GTEX-13CF3-1626-SM-5IFG9 18.4
GTEX-144GN-0626-SM-5O9B2 18.4
GTEX-11EM3-0826-SM-5N9CC 18.0
GTEX-144FL-2726-SM-5O98Z 17.2
GTEX-ZDYS-0826-SM-4WWCR 17.0
GTEX-RM2N-0726-SM-48FD5 16.8
GTEX-XXEK-0326-SM-4BRVV 16.7
GTEX-P78B-1026-SM-3NMC4 16.6
GTEX-QEL4-1426-SM-447AC 16.3
GTEX-13111-0826-SM-5LZV3 16.0
GTEX-139T6-0626-SM-5IFF9 15.8
GTEX-RNOR-1226-SM-48FDQ 15.8
GTEX-YEC3-2526-SM-4YCDN 15.8
GTEX-139UW-1126-SM-5IJEJ 15.6
GTEX-Z9EW-0526-SM-5HL8S 15.6
GTEX-1497J-2726-SM-5SI9W 15.5
GTEX-T2IS-0826-SM-4DM6L 15.3
GTEX-X3Y1-1326-SM-4PQZB 15.3
GTEX-ZYT6-1126-SM-5GZYR 15.1
GTEX-13FH7-0526-SM-5IJF8 15.0
GTEX-RU1J-0326-SM-46MUM 15.0
GTEX-ZYY3-1526-SM-5SIA9 15.0
GTEX-13X6K-2126-SM-5O9D4 14.9
GTEX-WFG8-1226-SM-4V6EI 14.7
GTEX-XMK1-1326-SM-4B65Q 14.7
GTEX-ZGAY-1126-SM-4WWBS 14.7
GTEX-QLQ7-0926-SM-447BC 14.6
GTEX-QESD-0826-SM-47J4G 14.4
GTEX-1211K-0926-SM-5FQTL 14.3
GTEX-S7SF-0926-SM-4AD4M 14.1
GTEX-WFG7-1126-SM-4LMK3 14.1
GTEX-13OVG-0626-SM-5IFEP 13.9
GTEX-11TT1-0526-SM-5P9JO 13.7
GTEX-PSDG-1326-SM-48TD2 13.7
GTEX-Y3I4-1226-SM-4TT8N 13.7
GTEX-YFC4-1226-SM-5LU9R 13.7
GTEX-11P81-0826-SM-5P9GR 13.6
GTEX-QEG5-1426-SM-447AS 13.5
GTEX-U3ZM-0526-SM-4DXTB 13.4
GTEX-P4QS-0626-SM-3NMD1 13.3
GTEX-U3ZH-1026-SM-4DXUZ 13.2
GTEX-11NSD-1126-SM-5N9BQ 13.1
GTEX-13U4I-1126-SM-5LU3S 13.1
GTEX-QV44-1126-SM-4R1KO 13.1
GTEX-UPK5-1226-SM-4IHL8 13.1
GTEX-X15G-0826-SM-4PQZD 13.1
GTEX-111CU-0726-SM-5GZYD 13.0
GTEX-OIZI-1426-SM-3NB1T 13.0
GTEX-TKQ1-0326-SM-4DXSM 13.0
GTEX-13S86-0826-SM-5SI6J 12.9
GTEX-R55E-1326-SM-48FCR 12.8
GTEX-T5JC-1726-SM-4DM6U 12.7
GTEX-X4EO-1226-SM-4QARR 12.7
GTEX-13D11-1926-SM-5IFGB 12.6
GTEX-145ME-0526-SM-5QGQV 12.6
GTEX-UPIC-1026-SM-4IHLT 12.5
GTEX-ZAB4-1126-SM-5HL86 12.4
GTEX-ZF3C-1626-SM-4WWB4 12.4
GTEX-13O1R-1326-SM-5IJF5 12.3
GTEX-13O21-0626-SM-5IJDI 12.3
GTEX-S32W-0926-SM-4AD5X 12.3
GTEX-Y5LM-1026-SM-4VDSQ 12.2
GTEX-ZPU1-1426-SM-4WWFU 12.2
GTEX-11I78-1526-SM-5A5K7 12.0
GTEX-11DZ1-2026-SM-5A5KG 11.8
GTEX-13PVQ-1726-SM-5IFF3 11.8
GTEX-145MF-1426-SM-5O9B6 11.8
GTEX-13FTW-1626-SM-5KM4N 11.7
GTEX-QLQW-0526-SM-4R1KS 11.7
GTEX-TSE9-1226-SM-4DXTM 11.7
GTEX-145LT-1126-SM-5LUA1 11.6
GTEX-ZZ64-0226-SM-5E44X 11.6
GTEX-R45C-1226-SM-48FEE 11.5
GTEX-ZA64-0626-SM-5HL9O 11.5
GTEX-Q2AI-0626-SM-48TZU 11.4
GTEX-S33H-0826-SM-4AD5Y 11.4
GTEX-W5WG-1626-SM-4LMKG 11.4
GTEX-Y5V5-1626-SM-4VDSG 11.4
GTEX-146FR-0426-SM-5SI97 11.3
GTEX-S3XE-0926-SM-4AD4S 11.3
GTEX-XLM4-2326-SM-4TT2D 10.9
GTEX-144GM-1426-SM-5LU31 10.8
GTEX-R55G-1026-SM-48FDI 10.7
GTEX-ZUA1-1226-SM-5NQ6O 10.6
GTEX-131XG-1026-SM-5GCMX 10.5
GTEX-SNMC-0526-SM-4DM69 10.5
GTEX-WQUQ-1626-SM-4OOSH 10.5
GTEX-Y3IK-1126-SM-51MSV 10.5
GTEX-13RTK-0526-SM-5S2QF 10.4
GTEX-ZVE2-1326-SM-5NQ94 10.4
GTEX-12ZZW-1726-SM-5DUVD 10.3
GTEX-NPJ8-1926-SM-3MJGB 10.3
GTEX-ZT9W-1326-SM-51MTB 10.3
GTEX-SNOS-0626-SM-4DM5F 10.2
GTEX-SUCS-0726-SM-4DM7J 10.2
GTEX-ZAB5-0926-SM-5CVMV 10.2
GTEX-Y114-0926-SM-4TT7J 10.0
GTEX-11ONC-1526-SM-5GU6S 9.7
GTEX-QCQG-0626-SM-48U21 9.7
GTEX-13FTX-0526-SM-5IFGS 9.6
GTEX-WK11-1026-SM-4OOS8 9.6
GTEX-RTLS-1126-SM-46MUQ 9.5
GTEX-OOBK-0625-SM-3LK5P 9.4
GTEX-XYKS-1526-SM-4BRUP 9.4
GTEX-13W3W-1626-SM-5LU35 9.3
GTEX-14AS3-0626-SM-5QGQD 9.3
GTEX-PWN1-0626-SM-48TDT 9.3
GTEX-12696-1326-SM-5FQTJ 9.2
GTEX-T6MO-0526-SM-4DM6R 9.2
GTEX-139TU-1226-SM-5J2NL 9.1
GTEX-U4B1-0826-SM-4DXTW 9.1
GTEX-11TUW-1326-SM-5EQKV 9.0
GTEX-1212Z-2126-SM-5FQTM 9.0
GTEX-12C56-1226-SM-5FQSU 9.0
GTEX-12WSA-1426-SM-5EGJU 9.0
GTEX-V1D1-1026-SM-4JBHE 9.0
GTEX-WFON-0826-SM-4LVMI 9.0
GTEX-YF7O-0926-SM-5IFIF 9.0
GTEX-14BMU-0926-SM-5S2QB 8.9
GTEX-WOFM-0626-SM-4OOS3 8.8
GTEX-139YR-1726-SM-5IFFK 8.7
GTEX-Q2AH-0826-SM-48TZN 8.7
GTEX-ZQUD-0426-SM-57WFR 8.7
GTEX-QVUS-0626-SM-447CC 8.6
GTEX-X4LF-0626-SM-4QASB 8.6
GTEX-ZTPG-1626-SM-5DUX2 8.6
GTEX-11DXY-1426-SM-5N9CN 8.5
GTEX-11P82-0526-SM-5986P 8.5
GTEX-13OVJ-1226-SM-5L3HA 8.5
GTEX-145MO-1426-SM-5Q5BS 8.5
GTEX-PLZ5-0926-SM-3TW8L 8.5
GTEX-VUSG-1226-SM-4KKZF 8.5
GTEX-11EQ9-0726-SM-5A5K2 8.4
GTEX-145MN-1026-SM-5NQ9G 8.3
GTEX-P4PQ-0626-SM-3NMCU 8.3
GTEX-14E1K-1226-SM-5S2PD 8.2
GTEX-U3ZN-1726-SM-4DXUQ 8.2
GTEX-OXRK-1326-SM-3NB1A 8.1
GTEX-R55D-1126-SM-48FEB 8.1
GTEX-T5JW-1326-SM-4DM5G 8.1
GTEX-UJHI-0826-SM-4IHLM 8.1
GTEX-UJMC-0926-SM-4IHLK 8.1
GTEX-WH7G-0926-SM-4LVMJ 8.1
GTEX-WVLH-1426-SM-4MVNX 8.1
GTEX-XUJ4-1026-SM-4BOPB 8.1
GTEX-11XUK-0826-SM-5GU6P 8.0
GTEX-132Q8-1826-SM-5EGIY 7.9
GTEX-132QS-1426-SM-5P9GE 7.9
GTEX-13NZB-1226-SM-5J2MW 7.9
GTEX-OIZH-0626-SM-3NB1L 7.9
GTEX-OXRL-0626-SM-3NM9C 7.9
GTEX-QEG4-0726-SM-4R1JL 7.9
GTEX-WRHK-0526-SM-4MVOF 7.9
GTEX-ZYVF-2226-SM-5GIDD 7.9
GTEX-147F3-0826-SM-5NQA7 7.8
GTEX-ZF2S-1226-SM-4WWAX 7.8
GTEX-11DYG-1326-SM-5N9DO 7.6
GTEX-WEY5-0926-SM-4LMI4 7.6
GTEX-ZC5H-1326-SM-5HL7E 7.6
GTEX-N7MT-0326-SM-48TDP 7.5
GTEX-ZXES-1126-SM-5GZXN 7.5
GTEX-RWS6-0826-SM-47JXF 7.4
GTEX-13FHO-1726-SM-5IFGM 7.3
GTEX-XBED-1026-SM-48TCB 7.3
GTEX-XK95-1026-SM-4GIDV 7.3
GTEX-XV7Q-1126-SM-4BRVS 7.3
GTEX-11GSP-1826-SM-5N9DQ 7.2
GTEX-13OW8-2326-SM-5L3I9 7.2
GTEX-13W46-1926-SM-5J2MF 7.2
GTEX-145LV-1326-SM-5S2QI 7.2
GTEX-14DAQ-1426-SM-5RQJD 7.2
GTEX-NFK9-1126-SM-3LK78 7.2
GTEX-131XE-1426-SM-5HL7V 7.1
GTEX-145LS-1826-SM-5LUAZ 7.1
GTEX-ZE9C-1126-SM-4WWBD 7.1
GTEX-13G51-0926-SM-5IFFU 7.0
GTEX-14BIN-2726-SM-5RQIE 7.0
GTEX-PLZ6-0526-SM-3P61C 7.0
GTEX-XMD2-1326-SM-4YCET 7.0
GTEX-12ZZX-1326-SM-5DUWI 6.9
GTEX-SE5C-1226-SM-4BRWV 6.9
GTEX-VJYA-0726-SM-4KL1T 6.9
GTEX-11NUK-1326-SM-5P9GN 6.8
GTEX-PVOW-1626-SM-48TC9 6.8
GTEX-1399S-1326-SM-5P9GH 6.7
GTEX-13O3Q-0826-SM-5IFGF 6.7
GTEX-O5YV-1026-SM-3LK72 6.7
GTEX-ZYW4-1326-SM-5E45N 6.7
GTEX-YB5E-0926-SM-4WWDQ 6.6
GTEX-14ICL-0526-SM-5RQJ6 6.5
GTEX-ZG7Y-1126-SM-4WWEZ 6.5
GTEX-11DXZ-1226-SM-5H11L 6.4
GTEX-12KS4-0926-SM-5BC5S 6.4
GTEX-OXRP-0926-SM-48TC1 6.4
GTEX-R53T-1126-SM-48FD4 6.4
GTEX-S4P3-0426-SM-4AD56 6.4
GTEX-131YS-1426-SM-5IJF7 6.3
GTEX-S95S-0426-SM-4B64I 6.3
GTEX-1122O-1726-SM-5GICM 6.1
GTEX-12WSD-1826-SM-5GCOA 6.1
GTEX-12WSK-1126-SM-5LZV8 6.0
GTEX-T8EM-0526-SM-4DM64 6.0
GTEX-ZVT2-1326-SM-5E45H 6.0
GTEX-R3RS-1326-SM-48FE7 5.9
GTEX-U8XE-1726-SM-4E3IF 5.9
GTEX-YECK-1626-SM-5IFHQ 5.9
GTEX-ZVP2-1326-SM-57WCE 5.9
GTEX-13PVR-1826-SM-5Q5CC 5.8
GTEX-117YX-1626-SM-5GZZG 5.6
GTEX-1399R-0826-SM-5IJEL 5.6
GTEX-11ZTS-2626-SM-5EGIC 5.5
GTEX-S341-0526-SM-4AD5U 5.5
GTEX-ZYFG-1126-SM-5GICY 5.5
GTEX-13OVI-2626-SM-5KM4T 5.4
GTEX-XUZC-0426-SM-4BOPE 5.4
GTEX-PWCY-0726-SM-48TCS 5.3
GTEX-QDVN-1026-SM-48TZA 5.3
GTEX-XQ8I-1526-SM-4BOOH 5.3
GTEX-11VI4-0526-SM-5EQ48 5.2
GTEX-11P7K-1326-SM-5BC5G 5.1
GTEX-13QBU-1026-SM-5LU3R 5.1
GTEX-ZF29-1326-SM-4WWB6 5.1
GTEX-PLZ4-1626-SM-3P618 5.0
GTEX-OIZG-1026-SM-3LK5X 4.9
GTEX-14C38-2126-SM-5RQJO 4.8
GTEX-XBEW-1326-SM-4AT63 4.7
GTEX-14H4A-1626-SM-5SI69 4.6
GTEX-ZPCL-1426-SM-57WEC 4.6
GTEX-ZY6K-0626-SM-59HJL 4.6
GTEX-13FLV-1126-SM-5J2NO 4.5
GTEX-XQ3S-1126-SM-4BOPK 4.2
GTEX-148VJ-1026-SM-5LU98 4.0
GTEX-RVPV-0526-SM-47JYL 4.0
GTEX-11ZU8-1526-SM-5EGHX 3.8
GTEX-P4PP-0626-SM-3NM9X 3.8
GTEX-QDVJ-0726-SM-48U1W 3.7
GTEX-TML8-1526-SM-4DXUX 3.7
GTEX-12BJ1-1626-SM-5HL8Y 3.6
GTEX-12ZZY-1426-SM-5N9EI 3.6
GTEX-REY6-1326-SM-48FDO 3.6
GTEX-RN64-1026-SM-48FDX 3.6
GTEX-1399Q-1126-SM-5P9JA 3.5
GTEX-X62O-2226-SM-46MW3 3.5
GTEX-YJ89-1526-SM-5P9IR 3.5
GTEX-ZLV1-0526-SM-4WWD4 3.5
GTEX-R55C-0826-SM-48FCL 3.1
GTEX-13QJ3-1726-SM-5RQK9 2.9
GTEX-P4QT-0626-SM-3NMCP 2.9
GTEX-XOTO-2126-SM-4B64U 2.8
GTEX-OXRN-1726-SM-3NM9B 2.7
GTEX-Y9LG-0626-SM-4WWDH 2.7
GTEX-ZTSS-0626-SM-59867 2.6
GTEX-132AR-2226-SM-5J2NT 2.5
GTEX-S4Q7-0626-SM-4AD5M 2.1
GTEX-X4XY-1726-SM-46MVO 2.0
GTEX-X585-1226-SM-46MW7 2.0
GTEX-117YW-1926-SM-5H121 1.9
GTEX-13X6I-1026-SM-5LU4C 1.4
GTEX-ZZPT-1426-SM-5N9C5 1.4
GTEX-14A6H-1326-SM-5NQBC 0.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

23.6

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 23.6
FF:10015-101C6 68,74,75 years, mixed 23.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.