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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:38.1TPM
GTEx:30.8RPKM
FANTOM5:46.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA063247

 

Antibody CAB017450

 

Glandular cells

Not detected   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

38.1

overview Male, age 65
Sample 1
TPM: 26.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 46.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 45.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 33.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

30.8

GTEx sample id

RPKM

21.725.331.013.144.4020406080100120140
 
21.725.331.013.144.4020406080100120140

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 30.8
Samples: 88

Max RPKM: 152.8
Min RPKM: 13.1
Std RPKM: 19.5
Median RPKM: 25.3
GTEX-ZC5H-2326-SM-4WAYT 152.8
GTEX-WEY5-1526-SM-4LMJF 93.1
GTEX-139YR-2226-SM-5IFFW 90.8
GTEX-ZTPG-2626-SM-57WFX 81.5
GTEX-1192X-2526-SM-59868 73.7
GTEX-VUSG-1726-SM-4KKZL 64.4
GTEX-ZQUD-0926-SM-57WE3 47.1
GTEX-117YX-0326-SM-5GICL 45.9
GTEX-11NSD-1726-SM-5N9C3 44.4
GTEX-1399R-2026-SM-5K7WN 44.0
GTEX-Y3IK-1726-SM-4YCCR 41.7
GTEX-13111-1426-SM-5DUW3 41.1
GTEX-131XG-1726-SM-5LZUR 40.8
GTEX-UPK5-2026-SM-4JBIM 37.6
GTEX-WFG8-1626-SM-4LVMB 37.3
GTEX-WFG7-1726-SM-4LVME 36.2
GTEX-X15G-1426-SM-4PQZK 35.0
GTEX-111CU-1326-SM-5NQ8L 33.7
GTEX-ZF2S-1726-SM-57WFT 33.7
GTEX-XXEK-1026-SM-4BRUW 33.5
GTEX-ZTSS-0926-SM-59865 32.7
GTEX-13D11-0726-SM-5LZZB 31.9
GTEX-XMK1-1826-SM-4B66F 30.7
GTEX-13O61-1326-SM-5KM31 30.4
GTEX-145ME-0926-SM-5O9AR 30.2
GTEX-133LE-1426-SM-5IFH1 30.1
GTEX-1399U-2126-SM-5IFEZ 28.9
GTEX-WRHK-1026-SM-4MVOD 28.7
GTEX-ZLFU-1526-SM-4WWBT 28.4
GTEX-Y5LM-1626-SM-4VDTB 28.3
GTEX-WH7G-1626-SM-4LVMY 27.4
GTEX-ZEX8-1826-SM-57WBH 27.3
GTEX-1399S-2026-SM-5KM4B 27.1
GTEX-ZPIC-2326-SM-57WDW 26.5
GTEX-YF7O-1826-SM-5IFIU 26.4
GTEX-13FTW-2026-SM-5IJE2 26.4
GTEX-XUZC-1426-SM-4BRV3 26.2
GTEX-ZQG8-2526-SM-57WEQ 25.9
GTEX-ZVZP-1826-SM-5GZXB 25.8
GTEX-ZP4G-1626-SM-57WGD 25.8
GTEX-XGQ4-1326-SM-4GIDU 25.5
GTEX-11DXX-1626-SM-5H11H 25.5
GTEX-131XF-1326-SM-5GCMQ 25.5
GTEX-ZA64-1226-SM-5HL7B 25.4
GTEX-XAJ8-0526-SM-47JYK 25.2
GTEX-ZVP2-1726-SM-5GU5P 24.7
GTEX-ZTX8-0526-SM-59HLD 24.1
GTEX-13113-1226-SM-5EGHT 23.5
GTEX-1122O-1326-SM-5H11F 23.4
GTEX-X5EB-1626-SM-4E3IV 23.3
GTEX-139T6-1026-SM-5IJGC 23.2
GTEX-13OVI-1926-SM-5IJCG 23.2
GTEX-ZYFG-2026-SM-5E43Y 23.2
GTEX-YB5E-1526-SM-5IFIE 23.2
GTEX-13QBU-1926-SM-5IJEW 23.1
GTEX-12BJ1-1926-SM-5HL9Z 23.0
GTEX-14E6E-1626-SM-5RQI7 23.0
GTEX-ZVT2-2126-SM-5NQ93 22.8
GTEX-11I78-1126-SM-5A5K5 22.8
GTEX-ZPCL-1726-SM-57WEO 22.7
GTEX-145LT-1026-SM-5LU9O 22.3
GTEX-ZYWO-1526-SM-5SIAL 22.2
GTEX-13FH7-1226-SM-5IJFK 22.1
GTEX-13RTK-0826-SM-5Q5C6 21.8
GTEX-11EQ9-1326-SM-5985X 21.8
GTEX-12WSK-1526-SM-5CVNO 21.7
GTEX-Y9LG-1626-SM-5IFHM 21.7
GTEX-11DXZ-1326-SM-5H11X 21.4
GTEX-WFJO-0926-SM-4LVM2 21.3
GTEX-XBED-1426-SM-4AT4G 21.1
GTEX-Z9EW-0926-SM-5CVMM 20.8
GTEX-11P82-0826-SM-5P9GU 20.8
GTEX-Y114-1426-SM-4TT6W 20.8
GTEX-WQUQ-2426-SM-4MVNW 20.8
GTEX-13O21-1026-SM-5IJDU 20.7
GTEX-YEC4-1726-SM-4W21E 20.3
GTEX-ZZ64-0526-SM-5GZXM 20.0
GTEX-14DAR-1426-SM-5RQIR 19.9
GTEX-13PL7-2626-SM-5IFH4 19.9
GTEX-ZXES-1526-SM-5NQ95 19.7
GTEX-11P7K-1626-SM-5GU63 19.7
GTEX-11XUK-1426-SM-5EQMG 19.6
GTEX-148VJ-2226-SM-5NQ9M 18.7
GTEX-ZLV1-1126-SM-4WWBW 18.5
GTEX-VJYA-0926-SM-4KL1N 18.4
GTEX-111YS-1426-SM-5GID8 18.0
GTEX-11VI4-1626-SM-5EQKO 16.1
GTEX-13CF3-1226-SM-5LZXN 13.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

46.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 46.2
FF:10024-101D6 15,40,85 years, mixed 46.2

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